BLASTX nr result

ID: Lithospermum22_contig00033035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033035
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519577.1| Eukaryotic translation initiation factor 3 s...   127   4e-27
ref|XP_002301653.1| predicted protein [Populus trichocarpa] gi|2...   119   1e-24
ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|2...   116   7e-24
gb|ABK92969.1| unknown [Populus trichocarpa]                          116   7e-24
ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation...   113   7e-23

>ref|XP_002519577.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223541235|gb|EEF42788.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 222

 Score =  127 bits (319), Expect = 4e-27
 Identities = 66/94 (70%), Positives = 75/94 (79%), Gaps = 2/94 (2%)
 Frame = -2

Query: 605 MEDWEDVHIPDILKKEQPKSTWDDEDVDDNAIKESWEDEDEPTPK--AEPPLEKISKKPV 432
           MEDWED  IP ++ KEQPKS WDDEDVDDN +KESWEDEDEP P+  A+PP EK +KKPV
Sbjct: 1   MEDWEDEQIPPLILKEQPKSKWDDEDVDDNDVKESWEDEDEPAPEPVAKPPPEKATKKPV 60

Query: 431 TKASEKKGKPVDVAKVDPAVEILDPVAEKLRQQR 330
           TK+ EKKGK V VAK +   + LDPVAEKLRQQR
Sbjct: 61  TKSIEKKGKTV-VAKEES--QPLDPVAEKLRQQR 91


>ref|XP_002301653.1| predicted protein [Populus trichocarpa] gi|222843379|gb|EEE80926.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  119 bits (298), Expect = 1e-24
 Identities = 59/94 (62%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
 Frame = -2

Query: 605 MEDWEDVHIPDILKKEQPKSTWDDEDVDDNAIKESWEDEDEPTPK--AEPPLEKISKKPV 432
           MEDWEDV +P +L KEQPK+ WDDEDVD++ +KESWEDEDEP P    +PP EK  KK  
Sbjct: 27  MEDWEDVQVPPLLSKEQPKNKWDDEDVDEDDVKESWEDEDEPAPAPVVKPPPEKAPKKSA 86

Query: 431 TKASEKKGKPVDVAKVDPAVEILDPVAEKLRQQR 330
            K++EKKGK V V K     E LDP+AEKLRQQR
Sbjct: 87  AKSTEKKGKTVQVLK----EEKLDPLAEKLRQQR 116


>ref|XP_002305897.1| predicted protein [Populus trichocarpa] gi|222848861|gb|EEE86408.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  116 bits (291), Expect = 7e-24
 Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
 Frame = -2

Query: 605 MEDWEDVHIPDILKKEQPKSTWDDEDVDDNAIKESWEDEDE--PTPKAEPPLEKISKKPV 432
           MEDWED  +P ++ K+QPKS WDDEDVD++ +KESWEDEDE  P P  +PP E   KKP 
Sbjct: 1   MEDWEDEQVPPLVAKDQPKSKWDDEDVDEDDVKESWEDEDEPDPAPVVKPPPEMAPKKPA 60

Query: 431 TKASEKKGKPVDVAKVDPAVEILDPVAEKLRQQR 330
            K++EKKG   DV K  P    LDP+AEKLRQQR
Sbjct: 61  VKSTEKKGNTTDVVKDQP----LDPLAEKLRQQR 90


>gb|ABK92969.1| unknown [Populus trichocarpa]
          Length = 222

 Score =  116 bits (291), Expect = 7e-24
 Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
 Frame = -2

Query: 605 MEDWEDVHIPDILKKEQPKSTWDDEDVDDNAIKESWEDEDE--PTPKAEPPLEKISKKPV 432
           MEDWED  +P ++ K+QPKS WDDEDVD++ +KESWEDEDE  P P  +PP E   KKP 
Sbjct: 1   MEDWEDEQVPPLVAKDQPKSKWDDEDVDEDDVKESWEDEDEPDPAPVVKPPPEMAPKKPA 60

Query: 431 TKASEKKGKPVDVAKVDPAVEILDPVAEKLRQQR 330
            K++EKKG   DV K  P    LDP+AEKLRQQR
Sbjct: 61  VKSTEKKGNTTDVVKDQP----LDPLAEKLRQQR 90


>ref|XP_002284709.1| PREDICTED: eukaryotic translation initiation factor 3 subunit J
           [Vitis vinifera] gi|296088327|emb|CBI36772.3| unnamed
           protein product [Vitis vinifera]
          Length = 222

 Score =  113 bits (282), Expect = 7e-23
 Identities = 57/94 (60%), Positives = 67/94 (71%), Gaps = 2/94 (2%)
 Frame = -2

Query: 605 MEDWEDVHIPDILKKEQPKSTWDDEDVDDNAIKESWEDEDEPTPK--AEPPLEKISKKPV 432
           MEDWED  I  + KKE+PK+ WDDED+DD+ +KESWEDEDEP P    +PP EK  KKPV
Sbjct: 1   MEDWEDEPITPLGKKEEPKNKWDDEDLDDDNVKESWEDEDEPAPAPVIQPPAEKPPKKPV 60

Query: 431 TKASEKKGKPVDVAKVDPAVEILDPVAEKLRQQR 330
            KA+EKKGK V+          LDPVAEK+RQQR
Sbjct: 61  EKATEKKGKAVEAV----TEVTLDPVAEKIRQQR 90


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