BLASTX nr result

ID: Lithospermum22_contig00033022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00033022
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vit...    63   5e-08

>ref|XP_002266755.1| PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]
          Length = 379

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 29/197 (14%)
 Frame = -2

Query: 693 CIDTWLRSHTTCPVCRAGIVVVSAPTSFPPTAQNHVIPV---------------EITXXX 559
           CIDTWL SHT CP+CRAGIV  +A    P  +  +  P+               EI    
Sbjct: 184 CIDTWLSSHTNCPMCRAGIVSSTAGAPSPEQSVENSGPLEEARVEIPENGGQFEEIEDEV 243

Query: 558 XXXXXXXXXXXXNVDIQAESSSALEIQDSGVNREKLVKRCVSADSFPMSMIKLEIVNL-- 385
                          ++ E SS  E+    V+  + ++R VS DS   SMI L + N+  
Sbjct: 244 CELRIGREEEGELGGVENERSSC-EVAKEEVDEIQPMRRSVSMDSLSASMISLALANVHP 302

Query: 384 -QVNGENQESPFNQRRDIC-----------STSRIHQRINEAAPSSYRDVRVKRSFSYGG 241
            + NG +     N ++ I            S  ++ +  +           +KRSFS  G
Sbjct: 303 QKSNGNSDSQLANSKKSIMPIVPKRVGGNQSLVKLMESSSMGRILQSGSTSMKRSFSCSG 362

Query: 240 RSFLSRLPQNANLVLPL 190
           + FL R  +  + VLPL
Sbjct: 363 KLFLLRHNRRRSSVLPL 379


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