BLASTX nr result

ID: Lithospermum22_contig00032882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032882
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36946.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248...    89   5e-16
ref|NP_199754.2| WD40/YVTN repeat and Bromo-WDR9-I-like domain-c...    87   1e-15
dbj|BAB09913.1| WD-40 repeat protein-like [Arabidopsis thaliana]       87   1e-15
ref|XP_002865733.1| transducin family protein [Arabidopsis lyrat...    87   2e-15

>emb|CBI36946.3| unnamed protein product [Vitis vinifera]
          Length = 1549

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/64 (65%), Positives = 49/64 (76%)
 Frame = -1

Query: 413  KSDFINRFPVPLSLDIIEKRLEKNYYRRMEALKYDINVMLSNAQSYFDGNRTFSKKMKNL 234
            K DF+NRFPVPL  ++I+ RLE NYYR +EA+K+DI VMLSNAQSYF  N   S KMK L
Sbjct: 1479 KLDFLNRFPVPLYPELIQARLENNYYRTLEAVKHDIMVMLSNAQSYFGRNAELSSKMKRL 1538

Query: 233  SHWF 222
            S WF
Sbjct: 1539 SDWF 1542


>ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248563 [Vitis vinifera]
          Length = 1766

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/64 (65%), Positives = 49/64 (76%)
 Frame = -1

Query: 413  KSDFINRFPVPLSLDIIEKRLEKNYYRRMEALKYDINVMLSNAQSYFDGNRTFSKKMKNL 234
            K DF+NRFPVPL  ++I+ RLE NYYR +EA+K+DI VMLSNAQSYF  N   S KMK L
Sbjct: 1696 KLDFLNRFPVPLYPELIQARLENNYYRTLEAVKHDIMVMLSNAQSYFGRNAELSSKMKRL 1755

Query: 233  SHWF 222
            S WF
Sbjct: 1756 SDWF 1759


>ref|NP_199754.2| WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein
            [Arabidopsis thaliana] gi|332008427|gb|AED95810.1|
            WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing
            protein [Arabidopsis thaliana]
          Length = 1677

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 37/64 (57%), Positives = 53/64 (82%)
 Frame = -1

Query: 410  SDFINRFPVPLSLDIIEKRLEKNYYRRMEALKYDINVMLSNAQSYFDGNRTFSKKMKNLS 231
            S + NRFPVPLSL++I  RLE NYYR +EAL++D++VMLSNA+++F  N++ + K+ NLS
Sbjct: 1608 SSYSNRFPVPLSLEVIRSRLENNYYRSVEALRHDVSVMLSNAETFFGRNKSVAAKISNLS 1667

Query: 230  HWFD 219
            +WFD
Sbjct: 1668 NWFD 1671


>dbj|BAB09913.1| WD-40 repeat protein-like [Arabidopsis thaliana]
          Length = 1576

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 37/64 (57%), Positives = 53/64 (82%)
 Frame = -1

Query: 410  SDFINRFPVPLSLDIIEKRLEKNYYRRMEALKYDINVMLSNAQSYFDGNRTFSKKMKNLS 231
            S + NRFPVPLSL++I  RLE NYYR +EAL++D++VMLSNA+++F  N++ + K+ NLS
Sbjct: 1507 SSYSNRFPVPLSLEVIRSRLENNYYRSVEALRHDVSVMLSNAETFFGRNKSVAAKISNLS 1566

Query: 230  HWFD 219
            +WFD
Sbjct: 1567 NWFD 1570


>ref|XP_002865733.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311568|gb|EFH41992.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1662

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/64 (57%), Positives = 52/64 (81%)
 Frame = -1

Query: 410  SDFINRFPVPLSLDIIEKRLEKNYYRRMEALKYDINVMLSNAQSYFDGNRTFSKKMKNLS 231
            S + NRFPVPLSL++I  RLE NYYR +EAL++D+ VMLSNA+++F  N++ + K+ NLS
Sbjct: 1593 SSYTNRFPVPLSLEVIRSRLENNYYRSVEALRHDVAVMLSNAETFFGRNKSVAAKISNLS 1652

Query: 230  HWFD 219
            +WFD
Sbjct: 1653 NWFD 1656


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