BLASTX nr result

ID: Lithospermum22_contig00032868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032868
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   390   e-106
emb|CBI15364.3| unnamed protein product [Vitis vinifera]              390   e-106
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   380   e-103
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   362   5e-98
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...   343   2e-92

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
            protein 1-like [Vitis vinifera]
          Length = 965

 Score =  390 bits (1003), Expect = e-106
 Identities = 190/254 (74%), Positives = 224/254 (88%)
 Frame = -1

Query: 775  TAAGFNDLLAVITHVSSPLPSNEQVLEFRVFNIHEGTQPIRGLLPLTPGSHLSWFGYTEE 596
            TA+GF D LAV+TH S  LPSN+Q+L+FRVFNI  GTQP++G +PLTPGS L+WFG++EE
Sbjct: 566  TASGFKDELAVVTHASHCLPSNDQMLKFRVFNISNGTQPLKGHVPLTPGSCLTWFGFSEE 625

Query: 595  GRLSSFDSKGILRVFMNQFGGSWLPLFSARKAKKSDENYWVVGLSSTKLFSVMCKSPDIF 416
            G+LSS+DSKG+LRVF NQFGGSWLPLFSA K +KS+ENYWV GL+  KLF ++CKSPD+F
Sbjct: 626  GQLSSYDSKGVLRVFTNQFGGSWLPLFSASK-EKSEENYWVAGLNMNKLFCIVCKSPDLF 684

Query: 415  PQATPKPVLTLLDLSFPLAASDLGAESLENEFMMNNMRIAEIQKTIEELAVAGHDTTALD 236
            P   PKPVLTLLDLSFPLA SDLGAE+LENEF++ NM + +IQ+ IEE+A AG DTT+LD
Sbjct: 685  PPVMPKPVLTLLDLSFPLATSDLGAETLENEFILKNMHLLQIQQRIEEMAAAGLDTTSLD 744

Query: 235  DEAFNTETALDRCILRLIGSCCNGDKLVRATELVKLLTLEKSVRGAIKLATAMKLPNLAD 56
            DEAFN ETALDRCILRLI SCCNGDK+VRATELVKLL+LEKSV+GAIKL TA+KLPNLA+
Sbjct: 745  DEAFNVETALDRCILRLIASCCNGDKIVRATELVKLLSLEKSVKGAIKLVTALKLPNLAE 804

Query: 55   RFNTILEERLNNET 14
            RFN+ILEERL NET
Sbjct: 805  RFNSILEERLLNET 818


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  390 bits (1003), Expect = e-106
 Identities = 190/254 (74%), Positives = 224/254 (88%)
 Frame = -1

Query: 775  TAAGFNDLLAVITHVSSPLPSNEQVLEFRVFNIHEGTQPIRGLLPLTPGSHLSWFGYTEE 596
            TA+GF D LAV+TH S  LPSN+Q+L+FRVFNI  GTQP++G +PLTPGS L+WFG++EE
Sbjct: 527  TASGFKDELAVVTHASHCLPSNDQMLKFRVFNISNGTQPLKGHVPLTPGSCLTWFGFSEE 586

Query: 595  GRLSSFDSKGILRVFMNQFGGSWLPLFSARKAKKSDENYWVVGLSSTKLFSVMCKSPDIF 416
            G+LSS+DSKG+LRVF NQFGGSWLPLFSA K +KS+ENYWV GL+  KLF ++CKSPD+F
Sbjct: 587  GQLSSYDSKGVLRVFTNQFGGSWLPLFSASK-EKSEENYWVAGLNMNKLFCIVCKSPDLF 645

Query: 415  PQATPKPVLTLLDLSFPLAASDLGAESLENEFMMNNMRIAEIQKTIEELAVAGHDTTALD 236
            P   PKPVLTLLDLSFPLA SDLGAE+LENEF++ NM + +IQ+ IEE+A AG DTT+LD
Sbjct: 646  PPVMPKPVLTLLDLSFPLATSDLGAETLENEFILKNMHLLQIQQRIEEMAAAGLDTTSLD 705

Query: 235  DEAFNTETALDRCILRLIGSCCNGDKLVRATELVKLLTLEKSVRGAIKLATAMKLPNLAD 56
            DEAFN ETALDRCILRLI SCCNGDK+VRATELVKLL+LEKSV+GAIKL TA+KLPNLA+
Sbjct: 706  DEAFNVETALDRCILRLIASCCNGDKIVRATELVKLLSLEKSVKGAIKLVTALKLPNLAE 765

Query: 55   RFNTILEERLNNET 14
            RFN+ILEERL NET
Sbjct: 766  RFNSILEERLLNET 779


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Cucumis
            sativus] gi|449477125|ref|XP_004154937.1| PREDICTED: WD
            repeat and HMG-box DNA-binding protein 1-like [Cucumis
            sativus]
          Length = 962

 Score =  380 bits (977), Expect = e-103
 Identities = 186/256 (72%), Positives = 220/256 (85%)
 Frame = -1

Query: 775  TAAGFNDLLAVITHVSSPLPSNEQVLEFRVFNIHEGTQPIRGLLPLTPGSHLSWFGYTEE 596
            TA+GF D LA +TH S+ LPSN+QVLEFR+ NI  GTQ +RG LPLTPGS+L+WFG++EE
Sbjct: 572  TASGFKDELAFVTHSSTCLPSNDQVLEFRILNISNGTQLLRGRLPLTPGSYLTWFGFSEE 631

Query: 595  GRLSSFDSKGILRVFMNQFGGSWLPLFSARKAKKSDENYWVVGLSSTKLFSVMCKSPDIF 416
            G+LSS+DSKG+LRVF NQ+GGSW+PLFSA K +KSDENYWV GL++ KLF V+CK+PD +
Sbjct: 632  GKLSSYDSKGVLRVFTNQYGGSWVPLFSASKERKSDENYWVAGLNANKLFCVICKNPDSY 691

Query: 415  PQATPKPVLTLLDLSFPLAASDLGAESLENEFMMNNMRIAEIQKTIEELAVAGHDTTALD 236
            PQ TPKPVLTLL+LSFPLA SDLGAE+LENEFMMN+M + +I  T+EE+A+ G   T LD
Sbjct: 692  PQVTPKPVLTLLNLSFPLALSDLGAEALENEFMMNDMYLKQIHGTMEEMALRGLYDTELD 751

Query: 235  DEAFNTETALDRCILRLIGSCCNGDKLVRATELVKLLTLEKSVRGAIKLATAMKLPNLAD 56
            DEAF+ E A DRCILRLI SCCNGDKLVRATELVKLL+LEKSV+GAIKL TA+KLPNLA+
Sbjct: 752  DEAFSIEAAQDRCILRLIASCCNGDKLVRATELVKLLSLEKSVKGAIKLVTALKLPNLAE 811

Query: 55   RFNTILEERLNNETIG 8
            RFN ILEERL NET G
Sbjct: 812  RFNAILEERLLNETKG 827


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
            gi|355484738|gb|AES65941.1| WD repeat-containing protein
            [Medicago truncatula]
          Length = 991

 Score =  362 bits (929), Expect = 5e-98
 Identities = 174/253 (68%), Positives = 212/253 (83%)
 Frame = -1

Query: 775  TAAGFNDLLAVITHVSSPLPSNEQVLEFRVFNIHEGTQPIRGLLPLTPGSHLSWFGYTEE 596
            TA+GF D L V+TH S  L SNEQVLEF +FNI +GTQP+RG LP+TPGS LSWFG++EE
Sbjct: 610  TASGFKDKLVVVTHASDCLSSNEQVLEFSLFNIAQGTQPLRGRLPITPGSSLSWFGFSEE 669

Query: 595  GRLSSFDSKGILRVFMNQFGGSWLPLFSARKAKKSDENYWVVGLSSTKLFSVMCKSPDIF 416
            G+L S+DSKG+LR++ +QFGGSW P+FSA K KK+DENYW+VGL++ KL  V+ K P+ F
Sbjct: 670  GQLCSYDSKGVLRLYTSQFGGSWFPVFSAIKEKKTDENYWMVGLNTNKLVCVVLKKPESF 729

Query: 415  PQATPKPVLTLLDLSFPLAASDLGAESLENEFMMNNMRIAEIQKTIEELAVAGHDTTALD 236
            PQ  PKP+LTL++LSFPLA SDLGAE+LENEFMMN+M + E+QK +EE+  AG D + LD
Sbjct: 730  PQVVPKPILTLMNLSFPLATSDLGAEALENEFMMNSMHLFEVQKKMEEMDNAGLDASLLD 789

Query: 235  DEAFNTETALDRCILRLIGSCCNGDKLVRATELVKLLTLEKSVRGAIKLATAMKLPNLAD 56
            D+AFN E A DRCILRLI SCCN DKLVRATELVKLL+LEKS++GAIKL TA+KLPNLA+
Sbjct: 790  DDAFNLEAAQDRCILRLIASCCNSDKLVRATELVKLLSLEKSMKGAIKLVTALKLPNLAE 849

Query: 55   RFNTILEERLNNE 17
            +FN ILEERL NE
Sbjct: 850  KFNDILEERLYNE 862


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Glycine
            max]
          Length = 994

 Score =  343 bits (880), Expect = 2e-92
 Identities = 170/254 (66%), Positives = 210/254 (82%), Gaps = 1/254 (0%)
 Frame = -1

Query: 775  TAAGFNDLLAVITHVSSPLPSNEQVLEFRVFNIHEGTQPIRGLLPLTPGSHLSWFGYTEE 596
            TA+GF D LAV+TH +  LPSN+Q+LEF  FNI  GTQ ++G LPL+PGS LSWFG++EE
Sbjct: 569  TASGFKDKLAVVTHATDGLPSNDQMLEFMAFNIPRGTQLLQGRLPLSPGSSLSWFGFSEE 628

Query: 595  GRLSSFDSKGILRVFMNQFGGSWLPLFSARKAKKSDENYWVVGLSSTKLFSVMCKSPDIF 416
            G+L S+DSKG+LR + ++FGG W+PLFSA K +KSDENYWV GL+++K+F V+CK P+ F
Sbjct: 629  GQLCSYDSKGVLRSYTSKFGGRWIPLFSATK-EKSDENYWVTGLNASKVFCVVCKKPEGF 687

Query: 415  PQATPKPVLTLLDLSFPLAASDLG-AESLENEFMMNNMRIAEIQKTIEELAVAGHDTTAL 239
            PQ  PKPVLT L LSFPLA+SDLG +ES E EFMMN++ + EIQ+T++E+   G DTT+L
Sbjct: 688  PQVMPKPVLTPLSLSFPLASSDLGGSESHEKEFMMNSLHLYEIQRTMDEMDSVGLDTTSL 747

Query: 238  DDEAFNTETALDRCILRLIGSCCNGDKLVRATELVKLLTLEKSVRGAIKLATAMKLPNLA 59
            DD+AFN E A D+CILRLI +CCN DKLVRATELVKLLTLEKS+RGAIKL TAMKLPNLA
Sbjct: 748  DDDAFNLEAAQDKCILRLIAACCNSDKLVRATELVKLLTLEKSMRGAIKLVTAMKLPNLA 807

Query: 58   DRFNTILEERLNNE 17
            +RF+ ILEERL  E
Sbjct: 808  ERFSCILEERLLEE 821


Top