BLASTX nr result

ID: Lithospermum22_contig00032821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032821
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878354.1| hypothetical protein ARALYDRAFT_324535 [Arab...   119   3e-25
ref|XP_002320744.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_002302548.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|NP_001189752.1| beige-related and WD-40 repeat-containing pr...   118   6e-25
ref|NP_182078.1| beige-related and WD-40 repeat-containing prote...   118   6e-25

>ref|XP_002878354.1| hypothetical protein ARALYDRAFT_324535 [Arabidopsis lyrata subsp.
            lyrata] gi|297324192|gb|EFH54613.1| hypothetical protein
            ARALYDRAFT_324535 [Arabidopsis lyrata subsp. lyrata]
          Length = 2860

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/74 (75%), Positives = 64/74 (86%)
 Frame = -3

Query: 224  VSSTADSSELLSPRSMEKLTASAAAEPYDSVSCAFVSYGSCTMDLADGWKYRSRLWYGVG 45
            ++S AD+S  +S   ME+L A+AAAEPY+SVSCAFVSYGSCTMDLAD WKYRSRLWYGVG
Sbjct: 1368 LASMADASGQISTAVMERLAAAAAAEPYESVSCAFVSYGSCTMDLADAWKYRSRLWYGVG 1427

Query: 44   MSSKTSDFGGGGSG 3
            + SKTS FGGGGSG
Sbjct: 1428 LPSKTSCFGGGGSG 1441


>ref|XP_002320744.1| predicted protein [Populus trichocarpa] gi|222861517|gb|EEE99059.1|
            predicted protein [Populus trichocarpa]
          Length = 1726

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/78 (69%), Positives = 67/78 (85%)
 Frame = -3

Query: 236  PAGSVSSTADSSELLSPRSMEKLTASAAAEPYDSVSCAFVSYGSCTMDLADGWKYRSRLW 57
            P   ++S AD++  +S   ME+LTA+AAAEP++SVSCAFVSYGSCTMDLA+GWK+RSRLW
Sbjct: 1516 PLDVLASMADANGQISASVMERLTAAAAAEPFESVSCAFVSYGSCTMDLAEGWKFRSRLW 1575

Query: 56   YGVGMSSKTSDFGGGGSG 3
            YGVG+ SKT+ FGGGGSG
Sbjct: 1576 YGVGLPSKTAPFGGGGSG 1593


>ref|XP_002302548.1| predicted protein [Populus trichocarpa] gi|222844274|gb|EEE81821.1|
            predicted protein [Populus trichocarpa]
          Length = 2104

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/78 (70%), Positives = 66/78 (84%)
 Frame = -3

Query: 236  PAGSVSSTADSSELLSPRSMEKLTASAAAEPYDSVSCAFVSYGSCTMDLADGWKYRSRLW 57
            P   ++S AD++  +S   ME+LTA+AAAEPY+SV CAFVSYGSC MDLA+GWK+RSRLW
Sbjct: 1389 PLDVLASMADANGQISASVMERLTAAAAAEPYESVLCAFVSYGSCMMDLAEGWKFRSRLW 1448

Query: 56   YGVGMSSKTSDFGGGGSG 3
            YGVGMSSKT+ FGGGGSG
Sbjct: 1449 YGVGMSSKTAPFGGGGSG 1466


>ref|NP_001189752.1| beige-related and WD-40 repeat-containing protein [Arabidopsis
            thaliana] gi|330255474|gb|AEC10568.1| beige-related and
            WD-40 repeat-containing protein [Arabidopsis thaliana]
          Length = 3001

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -3

Query: 236  PAGSVSSTADSSELLSPRSMEKLTASAAAEPYDSVSCAFVSYGSCTMDLADGWKYRSRLW 57
            P   ++S ADSS  +S  +ME+LTA++AAEPY+SVSCAFVSYGSC MDLA+GWKYRSRLW
Sbjct: 1491 PLDILASMADSSGQISAVAMERLTAASAAEPYESVSCAFVSYGSCAMDLAEGWKYRSRLW 1550

Query: 56   YGVGMSSKTSDFGGGGSG 3
            YGVG+ SK S  GGGGSG
Sbjct: 1551 YGVGLPSKPSSLGGGGSG 1568


>ref|NP_182078.1| beige-related and WD-40 repeat-containing protein [Arabidopsis
            thaliana] gi|2979554|gb|AAC06163.1| unknown protein
            [Arabidopsis thaliana] gi|330255473|gb|AEC10567.1|
            beige-related and WD-40 repeat-containing protein
            [Arabidopsis thaliana]
          Length = 2946

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/78 (70%), Positives = 65/78 (83%)
 Frame = -3

Query: 236  PAGSVSSTADSSELLSPRSMEKLTASAAAEPYDSVSCAFVSYGSCTMDLADGWKYRSRLW 57
            P   ++S ADSS  +S  +ME+LTA++AAEPY+SVSCAFVSYGSC MDLA+GWKYRSRLW
Sbjct: 1436 PLDILASMADSSGQISAVAMERLTAASAAEPYESVSCAFVSYGSCAMDLAEGWKYRSRLW 1495

Query: 56   YGVGMSSKTSDFGGGGSG 3
            YGVG+ SK S  GGGGSG
Sbjct: 1496 YGVGLPSKPSSLGGGGSG 1513


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