BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032798
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   110   3e-29
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   100   3e-24
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    96   4e-24
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    97   2e-23
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 90   5e-23

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  110 bits (274), Expect(2) = 3e-29
 Identities = 54/136 (39%), Positives = 82/136 (60%), Gaps = 4/136 (2%)
 Frame = -2

Query: 406 MFPKQVCASIKKMIRAFLWSGANDKYK-AKVSWDKVSRGKDEGGLGIKSLHDWN---MGY 239
           + P QV  ++++++++FLWSG++ +   AKV+WD+V   K EGGLGIKS+ +WN   +  
Sbjct: 117 LLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLK 176

Query: 238 HIWNIYYNKEILWEILWVKWLHSYRLKGNSFWGVKEKSTYSWIWRKFLRLRVHIKPFISV 59
           HIWN+  + +     +W  W+ S  L+G +FW +K     SW W K L+LR    P +  
Sbjct: 177 HIWNLCNDSD---GSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKY 233

Query: 58  RIGDGDRCNFLFDNWH 11
            IGDG   +  FDNWH
Sbjct: 234 IIGDGMTTSLWFDNWH 249



 Score = 43.9 bits (102), Expect(2) = 3e-29
 Identities = 19/41 (46%), Positives = 26/41 (63%)
 Frame = -3

Query: 531 CRSLIVGIKNKIEIWRHKKVNYVGRVVLINSVLFGASNYWA 409
           C+ L+  I +K+  W  + ++Y GRV LINSVLF    YWA
Sbjct: 73  CKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWA 113


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 99.8 bits (247), Expect(2) = 3e-24
 Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
 Frame = -2

Query: 400 PKQVCASIKKMIRAFLWSGAN-DKYKAKVSWDKVSRGKDEGGLGIKSLHDWNMGYH---I 233
           P      I  +  AFLWSG    + KAKVSWD + + K EGGLG++SL + N+      I
Sbjct: 237 PSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLI 296

Query: 232 WNIYYNKEILWEILWVKWLHSYRLKGNSFWGVKEKSTY-SWIWRKFLRLRVHIKPFISVR 56
           W +  N + LW    VKW     LK  SFW +   S+  SW+W+K L+ R   KPF  V 
Sbjct: 297 WRVTSNDDSLW----VKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVE 352

Query: 55  IGDGDRCNFLFDNW 14
           + +G R +F FDNW
Sbjct: 353 VNNGARTSFWFDNW 366



 Score = 37.4 bits (85), Expect(2) = 3e-24
 Identities = 15/45 (33%), Positives = 28/45 (62%)
 Frame = -3

Query: 546 ISTKDCRSLIVGIKNKIEIWRHKKVNYVGRVVLINSVLFGASNYW 412
           ++ +D   L   I+N+I  W  + +++ GR+ LI+SVL+   N+W
Sbjct: 186 LTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFW 230


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 95.5 bits (236), Expect(2) = 4e-24
 Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 11/152 (7%)
 Frame = -2

Query: 436 LIWSLK---LLGSMFPKQVCASIKKMIRAFLWSGAN-DKYKAKVSWDKVSRGKDEGGLGI 269
           ++WS+    +     P++    I ++  A LWSG   +  KAKVSWD++ + K EGGLG+
Sbjct: 538 VLWSITNFWMNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGL 597

Query: 268 KSLHDWNMGYHIWNIYYNKEILWEIL------WVKWLHSYRLKGNSFWGVKEKSTY-SWI 110
           +SL + N    +       +++W +L      WVKW     LK  SFW +   ST  SWI
Sbjct: 598 QSLREANKVSSL-------KLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWI 650

Query: 109 WRKFLRLRVHIKPFISVRIGDGDRCNFLFDNW 14
           WR+ L+ R   K F  + + +G   +F FDNW
Sbjct: 651 WRRLLKHREVAKSFCKIEVNNGVNTSFWFDNW 682



 Score = 41.2 bits (95), Expect(2) = 4e-24
 Identities = 17/45 (37%), Positives = 30/45 (66%)
 Frame = -3

Query: 546 ISTKDCRSLIVGIKNKIEIWRHKKVNYVGRVVLINSVLFGASNYW 412
           ++T D   LI  I+ +I +W  + +++ GR+ LINSVL+  +N+W
Sbjct: 502 LTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFW 546


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 97.1 bits (240), Expect(2) = 2e-23
 Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
 Frame = -2

Query: 400  PKQVCASIKKMIRAFLWSGAN-DKYKAKVSWDKVSRGKDEGGLGIKSLHDWNMGYH---I 233
            P      I  +  AFLWSG   ++ KAKVSWD + + K +GGLG++SL + N+      I
Sbjct: 749  PSACLKEINSICSAFLWSGPELNRRKAKVSWDDICKPK-QGGLGLRSLTEANVVSVLKLI 807

Query: 232  WNIYYNKEILWEILWVKWLHSYRLKGNSFWGVKEKSTY-SWIWRKFLRLRVHIKPFISVR 56
            W +  N + LW    VKW     LK  SFW +K  S+  SW+W+K L+ R   KPF  V 
Sbjct: 808  WRVTSNDDSLW----VKWSKMNLLKQESFWSLKPNSSLGSWMWKKMLKYRETAKPFSRVE 863

Query: 55   IGDGDRCNFLFDNW 14
            + +G R +F FDNW
Sbjct: 864  VNNGARTSFWFDNW 877



 Score = 37.4 bits (85), Expect(2) = 2e-23
 Identities = 15/45 (33%), Positives = 28/45 (62%)
 Frame = -3

Query: 546 ISTKDCRSLIVGIKNKIEIWRHKKVNYVGRVVLINSVLFGASNYW 412
           ++ +D   L   I+N+I  W  + +++ GR+ LI+SVL+   N+W
Sbjct: 698 LTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFW 742


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 90.1 bits (222), Expect(2) = 5e-23
 Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 8/140 (5%)
 Frame = -2

Query: 400 PKQVCASIKKMIRAFLWSGAN-DKYKAKVSWDKVSRGKDEGGLGIKSLHDWNMGYHIWNI 224
           P      I+K+  AFLWSG   +  KAK++W  + + K EGGLGIKSL + N    +   
Sbjct: 405 PAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCL--- 461

Query: 223 YYNKEILWEI------LWVKWLHSYRLKGNSFWGVKEKSTY-SWIWRKFLRLRVHIKPFI 65
               +++W +      LWV W+ +Y ++  SFW   ++S+  SW+W+K L+ R   K   
Sbjct: 462 ----KLIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMC 517

Query: 64  SVRIGDGDRCNFLFDNWHRL 5
            V I  G   +F +DNW +L
Sbjct: 518 KVEIKSGSSTSFWYDNWSQL 537



 Score = 42.7 bits (99), Expect(2) = 5e-23
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = -3

Query: 546 ISTKDCRSLIVGIKNKIEIWRHKKVNYVGRVVLINSVLFGASNYW 412
           ++T D   L+  +++KI  W  + ++Y GR+ LINSV+   SN+W
Sbjct: 354 MTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFW 398