BLASTX nr result

ID: Lithospermum22_contig00032783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032783
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27699.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat...    89   3e-16
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]    89   3e-16
ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp....    89   4e-16
ref|XP_002873361.1| pentatricopeptide repeat-containing protein ...    89   4e-16

>emb|CBI27699.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   HGYSLKCGLESHTLVGNALLSMYAKIGHIVC--ASSVFDEILVKDVVSWNAVIAGYLENK 176
           H Y +K GLESHTL GNAL+SMYAK G +VC  A + F+ I  KDVVSWNAVIAG+ ENK
Sbjct: 103 HSYVIKSGLESHTLAGNALISMYAKCG-LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENK 161

Query: 177 LLSDAFQLFQSMVK 218
              +AF+LF +M+K
Sbjct: 162 FTEEAFKLFHAMLK 175


>ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   HGYSLKCGLESHTLVGNALLSMYAKIGHIVC--ASSVFDEILVKDVVSWNAVIAGYLENK 176
           H Y +K GLESHTL GNAL+SMYAK G +VC  A + F+ I  KDVVSWNAVIAG+ ENK
Sbjct: 164 HSYVIKSGLESHTLAGNALISMYAKCG-LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENK 222

Query: 177 LLSDAFQLFQSMVK 218
              +AF+LF +M+K
Sbjct: 223 FTEEAFKLFHAMLK 236


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3    HGYSLKCGLESHTLVGNALLSMYAKIGHIVC--ASSVFDEILVKDVVSWNAVIAGYLENK 176
            H Y +K GLESHTL GNAL+SMYAK G +VC  A + F+ I  KDVVSWNAVIAG+ ENK
Sbjct: 1096 HSYVIKSGLESHTLAGNALISMYAKCG-LVCSDAYAAFNRIEFKDVVSWNAVIAGFSENK 1154

Query: 177  LLSDAFQLFQSMVK 218
               +AF+LF +M+K
Sbjct: 1155 FTEEAFKLFHAMLK 1168


>ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319203|gb|EFH49625.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   HGYSLKCGLESHTLVGNALLSMYAKIGHIVC-ASSVFDEILVKDVVSWNAVIAGYLENKL 179
           H Y +K GLE  TLVGNAL+SMYAK G+I+  A + FD+I  KDVVSWNA+IAG+ ENK+
Sbjct: 145 HSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKM 204

Query: 180 LSDAFQLFQSMVK 218
           ++DAF+ F  M+K
Sbjct: 205 MADAFRSFCLMLK 217



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   HGYSL-KCGLESHTLVGNALLSMYAKIGHIVCASSVFDEILVKDVVSWNAVIAGYLENKL 179
           H Y + +  L++H  V N+L+S Y ++G I  A+S+F  +  KD+VSWN VIAGY  N  
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHE 309

Query: 180 LSDAFQLFQSMVK 218
              A QLF ++V+
Sbjct: 310 WLKALQLFHNLVQ 322


>ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319198|gb|EFH49620.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 849

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   HGYSLKCGLESHTLVGNALLSMYAKIGHIVC-ASSVFDEILVKDVVSWNAVIAGYLENKL 179
           H Y +K GLE  TLVGNAL+SMYAK G+I+  A + FD+I  KDVVSWNA+IAG+ ENK+
Sbjct: 145 HSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKM 204

Query: 180 LSDAFQLFQSMVK 218
           ++DAF+ F  M+K
Sbjct: 205 MADAFRSFCLMLK 217



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   HGYSL-KCGLESHTLVGNALLSMYAKIGHIVCASSVFDEILVKDVVSWNAVIAGYLENKL 179
           H Y + +  L++H  V N+L+S Y ++G I  A+S+F  +  KD+VSWN VIAGY  N  
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHE 309

Query: 180 LSDAFQLFQSMVK 218
              A QLF ++V+
Sbjct: 310 WLKALQLFHNLVQ 322


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