BLASTX nr result

ID: Lithospermum22_contig00032765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032765
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003517434.1| PREDICTED: LOW QUALITY PROTEIN: putative tra...    79   4e-13
emb|CAB40954.1| putative protein [Arabidopsis thaliana] gi|72679...    78   8e-13
ref|NP_192950.2| glycine cleavage T-protein family protein [Arab...    78   8e-13
ref|XP_002872645.1| aminomethyltransferase [Arabidopsis lyrata s...    77   2e-12

>ref|XP_002329854.1| predicted protein [Populus trichocarpa] gi|222871091|gb|EEF08222.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/70 (58%), Positives = 49/70 (70%), Gaps = 8/70 (11%)
 Frame = +3

Query: 129 PMSSLLKTRSVVRFSGPDTVKFLQGLITNDVNRLVEPPQTTAT--------SAYHKPVYA 284
           P+ SLLK+RSV+RFSGPDT+KFLQGL+TNDV +  E P  T +        S Y  P+YA
Sbjct: 22  PLVSLLKSRSVIRFSGPDTIKFLQGLLTNDVKKFSELPSGTTSYVPTPNLPSVYVPPMYA 81

Query: 285 AMLTAQGRFL 314
           A LT QGRFL
Sbjct: 82  AFLTPQGRFL 91


>ref|XP_003517434.1| PREDICTED: LOW QUALITY PROTEIN: putative transferase CAF17 homolog,
           mitochondrial-like [Glycine max]
          Length = 411

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/72 (59%), Positives = 51/72 (70%), Gaps = 10/72 (13%)
 Frame = +3

Query: 129 PMSSLLKTRSVVRFSGPDTVKFLQGLITNDVNRLVEP----------PQTTATSAYHKPV 278
           P++SLLK+RSV+RF GPDT+KFLQGL+TNDV RL EP          P   ATS    P+
Sbjct: 40  PVASLLKSRSVIRFRGPDTLKFLQGLLTNDVRRLGEPVGDRTENLPTPNVPATS--FPPI 97

Query: 279 YAAMLTAQGRFL 314
           YAA+LT QGRFL
Sbjct: 98  YAALLTPQGRFL 109


>emb|CAB40954.1| putative protein [Arabidopsis thaliana] gi|7267914|emb|CAB78256.1|
           putative protein [Arabidopsis thaliana]
          Length = 363

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/70 (60%), Positives = 48/70 (68%), Gaps = 8/70 (11%)
 Frame = +3

Query: 129 PMSSLLKTRSVVRFSGPDTVKFLQGLITNDVNRLVEP--------PQTTATSAYHKPVYA 284
           PM+S LK+RSVVRFSGPDTVKFLQGL+TNDV R  E         P     S  + P+YA
Sbjct: 30  PMASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYA 89

Query: 285 AMLTAQGRFL 314
           A+LT QGRFL
Sbjct: 90  ALLTPQGRFL 99


>ref|NP_192950.2| glycine cleavage T-protein family protein [Arabidopsis thaliana]
           gi|22655070|gb|AAM98126.1| putative protein [Arabidopsis
           thaliana] gi|30725630|gb|AAP37837.1| At4g12130
           [Arabidopsis thaliana] gi|332657699|gb|AEE83099.1|
           glycine cleavage T-protein family protein [Arabidopsis
           thaliana]
          Length = 393

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/70 (60%), Positives = 48/70 (68%), Gaps = 8/70 (11%)
 Frame = +3

Query: 129 PMSSLLKTRSVVRFSGPDTVKFLQGLITNDVNRLVEP--------PQTTATSAYHKPVYA 284
           PM+S LK+RSVVRFSGPDTVKFLQGL+TNDV R  E         P     S  + P+YA
Sbjct: 30  PMASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVTNPPMYA 89

Query: 285 AMLTAQGRFL 314
           A+LT QGRFL
Sbjct: 90  ALLTPQGRFL 99


>ref|XP_002872645.1| aminomethyltransferase [Arabidopsis lyrata subsp. lyrata]
           gi|297318482|gb|EFH48904.1| aminomethyltransferase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/70 (60%), Positives = 47/70 (67%), Gaps = 8/70 (11%)
 Frame = +3

Query: 129 PMSSLLKTRSVVRFSGPDTVKFLQGLITNDVNRLVEP--------PQTTATSAYHKPVYA 284
           PM+S LK+RSVVRFSGPDTVKFLQGL+TNDV R  E         P     S    P+YA
Sbjct: 30  PMASRLKSRSVVRFSGPDTVKFLQGLLTNDVRRFGESSGEKNSAVPTPNMASVSTPPMYA 89

Query: 285 AMLTAQGRFL 314
           A+LT QGRFL
Sbjct: 90  ALLTPQGRFL 99


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