BLASTX nr result

ID: Lithospermum22_contig00032710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032710
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit...   390   e-106
ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|2...   385   e-104
ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu...   383   e-104
ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like...   382   e-103

>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
            gi|296084820|emb|CBI27702.3| unnamed protein product
            [Vitis vinifera]
          Length = 692

 Score =  390 bits (1003), Expect = e-106
 Identities = 187/295 (63%), Positives = 225/295 (76%), Gaps = 8/295 (2%)
 Frame = +3

Query: 264  MVLNRNASMKRVKRRRVTADLYDFLTFPAAEESA-APFRVAVKEFLSKHATLPPPCTLFP 440
            MV+N    MKR+K R VTADLYDFL FPAA + A  PFR  VK FL+KHA LPPP +L P
Sbjct: 1    MVVN-GRPMKRMKMR-VTADLYDFLAFPAAGDFAEGPFRTTVKSFLTKHALLPPPGSLLP 58

Query: 441  HLLTWQMLFRXXXXXXXXXXXXXXXXXX-------ARSKNLYCDQCRVVGWSNNPVCTKR 599
            HLLTWQ+ FR                         ARS+++YCDQCRVVGWS NPVCTKR
Sbjct: 59   HLLTWQIWFRVGEAVVDGGESSPAVVCLDVVEEDVARSRSVYCDQCRVVGWSGNPVCTKR 118

Query: 600  YHFIIKANGYSIGGYQKSCAKCSEVIHMAEARCSSCSHVMTAEDVENWMYQQLEDTTHLL 779
            YHFIIKA+G SIGGY KSC  C  V+H++++RC SC+ +MTA+D E+W+Y QL+DTTHLL
Sbjct: 119  YHFIIKADGNSIGGYYKSCTSCGVVLHLSDSRCKSCNKLMTADDTEDWVYHQLDDTTHLL 178

Query: 780  HGVIHANGLGHLLRVNGREGGSKLLSGSQVMNFWDRLCKVLGVRKISVMDVSKKYGLEYR 959
            HGV+HANG GHLLRVNGREGGS++LSG  +M+FWDRLCK LGVRK+SVMDVSKK+GLE+R
Sbjct: 179  HGVVHANGYGHLLRVNGREGGSRILSGCHIMDFWDRLCKNLGVRKVSVMDVSKKHGLEFR 238

Query: 960  LLHAVVKGHSWYGDWGYEFGTGSFGLTRNAYKWAAENMSSIRLDVFYSRGRTPRS 1124
            LLHA+ KGH WYG+WGYEFG GSF LT +AYK A E +S++ L +F S+GR PR+
Sbjct: 239  LLHAITKGHPWYGEWGYEFGAGSFALTLDAYKAAVETLSTLPLSIFVSQGRKPRT 293


>ref|XP_002305350.1| predicted protein [Populus trichocarpa] gi|222848314|gb|EEE85861.1|
            predicted protein [Populus trichocarpa]
          Length = 688

 Score =  385 bits (988), Expect = e-104
 Identities = 185/311 (59%), Positives = 227/311 (72%), Gaps = 23/311 (7%)
 Frame = +3

Query: 264  MVLNRNASMKRVKRRRVTADLYDFLTFPAAEESAA---------------PFRVAVKEFL 398
            MV+N    +KR+KRR VTADLY+FLTFPA+  S++               PFR  V+ FL
Sbjct: 1    MVVN-GRPIKRMKRR-VTADLYNFLTFPASSSSSSSSSSSSSSSLPPPRGPFRSNVRSFL 58

Query: 399  SKHATLPPPCTLFPHLLTWQMLFRXXXXXXXXXXXXXXXXXX--------ARSKNLYCDQ 554
            ++HA LPPP +LFPHLLTWQ+ FR                          ARS+ +YCDQ
Sbjct: 59   TEHALLPPPSSLFPHLLTWQISFRVGDLVESGGGEAGSAVVSLDVVEEDVARSRTVYCDQ 118

Query: 555  CRVVGWSNNPVCTKRYHFIIKANGYSIGGYQKSCAKCSEVIHMAEARCSSCSHVMTAEDV 734
            CRVVGWS +PVC+KRYHFIIK +G SIGGY K C  C +++H++E+RC +C HV+TA+DV
Sbjct: 119  CRVVGWSEHPVCSKRYHFIIKGDGNSIGGYHKPCTCCGDILHLSESRCKACDHVITADDV 178

Query: 735  ENWMYQQLEDTTHLLHGVIHANGLGHLLRVNGREGGSKLLSGSQVMNFWDRLCKVLGVRK 914
            E W+Y QLEDTTHLLHGVIHANG GHLLRVNG+EGGS++LSG  +M+FWDRLCK LGVRK
Sbjct: 179  EEWVYHQLEDTTHLLHGVIHANGYGHLLRVNGKEGGSRVLSGCHIMDFWDRLCKSLGVRK 238

Query: 915  ISVMDVSKKYGLEYRLLHAVVKGHSWYGDWGYEFGTGSFGLTRNAYKWAAENMSSIRLDV 1094
            +SVMDVSKKYG+EYRLLHA+ KGHSWYGDWGYEFG GSFGLT +AYK A E +SS+ + +
Sbjct: 239  VSVMDVSKKYGIEYRLLHAITKGHSWYGDWGYEFGAGSFGLTVDAYKPAVETLSSLPVSI 298

Query: 1095 FYSRGRTPRSR 1127
            F S G+   +R
Sbjct: 299  FLSEGQKTHTR 309


>ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|222862167|gb|EEE99673.1|
            predicted protein [Populus trichocarpa]
          Length = 679

 Score =  384 bits (987), Expect = e-104
 Identities = 185/308 (60%), Positives = 229/308 (74%), Gaps = 20/308 (6%)
 Frame = +3

Query: 264  MVLNRNASMKRVKRRRVTADLYDFLTFPAAEESAA------------PFRVAVKEFLSKH 407
            MV+N    +KR+KRR VTADLY+FL+FP++  S++            PFR  ++ FL++H
Sbjct: 1    MVVN-GRPIKRMKRR-VTADLYNFLSFPSSPSSSSSSSSSSPPPPRGPFRSNIRSFLTEH 58

Query: 408  ATLPPPCTLFPHLLTWQMLFRXXXXXXXXXXXXXXXXXX--------ARSKNLYCDQCRV 563
            A LPPP +LFPHLLTWQ+ F+                          ARS+++YCDQCRV
Sbjct: 59   ALLPPPSSLFPHLLTWQISFQVGDLVGCGGAEAGGGVVSLDVVEEDVARSRSVYCDQCRV 118

Query: 564  VGWSNNPVCTKRYHFIIKANGYSIGGYQKSCAKCSEVIHMAEARCSSCSHVMTAEDVENW 743
            VGWS +PVC+KRYHFIIKA+G SIGGY K C  C +V+H++E+RC +C+HV TA+DVE W
Sbjct: 119  VGWSGHPVCSKRYHFIIKADGNSIGGYHKPCTCCGDVLHLSESRCKTCNHVTTADDVEEW 178

Query: 744  MYQQLEDTTHLLHGVIHANGLGHLLRVNGREGGSKLLSGSQVMNFWDRLCKVLGVRKISV 923
            +Y QLEDTTHLLHGVIHANG GHLLRVNG+EGGS++LSG  +M+FWDRLCK LGVRK+SV
Sbjct: 179  IYHQLEDTTHLLHGVIHANGFGHLLRVNGKEGGSRVLSGVHIMDFWDRLCKTLGVRKVSV 238

Query: 924  MDVSKKYGLEYRLLHAVVKGHSWYGDWGYEFGTGSFGLTRNAYKWAAENMSSIRLDVFYS 1103
            MDVSKKYGLEYRLLHA+ KGHSWYGDWGYEFG GSFGLT  AYK A E +SS+ L +F S
Sbjct: 239  MDVSKKYGLEYRLLHAITKGHSWYGDWGYEFGAGSFGLTVYAYKSAVETLSSLPLSIFLS 298

Query: 1104 RGRTPRSR 1127
             G+  ++R
Sbjct: 299  EGQKLQTR 306


>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
            gi|223542200|gb|EEF43744.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 677

 Score =  383 bits (983), Expect = e-104
 Identities = 181/281 (64%), Positives = 215/281 (76%), Gaps = 7/281 (2%)
 Frame = +3

Query: 288  MKRVKRRRVTADLYDFLTFPAAEESA-APFRVAVKEFLSKHATLPPPCTLFPHLLTWQML 464
            +KR+KRR VTADL DFLTFP+  ES   PFR  +K FL +HA  PPP +LFPHL+TWQ+ 
Sbjct: 8    LKRMKRR-VTADLCDFLTFPSGFESPRGPFRTNIKSFLMEHALFPPPSSLFPHLMTWQIS 66

Query: 465  FRXXXXXXXXXXXXXXXXXX------ARSKNLYCDQCRVVGWSNNPVCTKRYHFIIKANG 626
            FR                        ARS+++YCDQCRVVGWS +PVC KRYHFIIKA+G
Sbjct: 67   FRVGDLTDGLDSSPAVVSLDIVEEDVARSRSVYCDQCRVVGWSGHPVCCKRYHFIIKADG 126

Query: 627  YSIGGYQKSCAKCSEVIHMAEARCSSCSHVMTAEDVENWMYQQLEDTTHLLHGVIHANGL 806
             SIGGY+K C  C+ V+H++E RC  C+HV T +DVE+W+Y QLEDTTHLLHGV+HANG 
Sbjct: 127  NSIGGYRKPCTCCAYVLHVSELRCKICNHVTTTDDVEDWVYHQLEDTTHLLHGVVHANGY 186

Query: 807  GHLLRVNGREGGSKLLSGSQVMNFWDRLCKVLGVRKISVMDVSKKYGLEYRLLHAVVKGH 986
            GHLLRVNGREGGS++LSG  +M+FWDRLCK LGVRK+SVMDVSKKYGLEYRLLHA++KGH
Sbjct: 187  GHLLRVNGREGGSRILSGCHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHAIIKGH 246

Query: 987  SWYGDWGYEFGTGSFGLTRNAYKWAAENMSSIRLDVFYSRG 1109
             WYGDWGYEFG GSF LT +AYK A E +SSI L +F S+G
Sbjct: 247  PWYGDWGYEFGAGSFALTVDAYKSAVETLSSIPLSIFLSQG 287


>ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
          Length = 699

 Score =  382 bits (980), Expect = e-103
 Identities = 180/298 (60%), Positives = 223/298 (74%), Gaps = 10/298 (3%)
 Frame = +3

Query: 264  MVLNRNASMKRVKRRRVTADLYDFLTFP----AAEESAA--PFRVAVKEFLSKHATLPPP 425
            MV++    +KR  ++RVTAD YDFLTFP    A  E+ A  PFR  V+ FL+KHA LPPP
Sbjct: 1    MVVSGGKGLKRAAKKRVTADFYDFLTFPTPALAESENFAGGPFRSNVRAFLTKHALLPPP 60

Query: 426  CTLFPHLLTWQMLFRXXXXXXXXXXXXXXXXXX----ARSKNLYCDQCRVVGWSNNPVCT 593
              LFPHLLTWQ++FR                      ARS+++YCDQCRV GWS +PVC 
Sbjct: 61   SALFPHLLTWQIVFRVGELTEGPDAPAVCLDVVEEDVARSRSVYCDQCRVFGWSGHPVCG 120

Query: 594  KRYHFIIKANGYSIGGYQKSCAKCSEVIHMAEARCSSCSHVMTAEDVENWMYQQLEDTTH 773
            KRYHFIIKA+G SIGGY K C  C +++H++E++C SC+HV T +DVE+W+Y QLE+TTH
Sbjct: 121  KRYHFIIKADGSSIGGYHKPCMCCGDILHLSESKCKSCNHVTTTDDVEDWVYHQLENTTH 180

Query: 774  LLHGVIHANGLGHLLRVNGREGGSKLLSGSQVMNFWDRLCKVLGVRKISVMDVSKKYGLE 953
            LLHGV+HANG GHLLRVNGREGGS+ LSG  +M+FWDRLCK LGVRK+SVMDVSKKYG+E
Sbjct: 181  LLHGVVHANGYGHLLRVNGREGGSRFLSGIHIMDFWDRLCKTLGVRKVSVMDVSKKYGIE 240

Query: 954  YRLLHAVVKGHSWYGDWGYEFGTGSFGLTRNAYKWAAENMSSIRLDVFYSRGRTPRSR 1127
            YR+LHA++KGH WYGDWGY+FG+GS+ LT  AYK A E++S++ L  F S GR P SR
Sbjct: 241  YRMLHAIMKGHPWYGDWGYKFGSGSYCLTHEAYKSAVESLSNLPLSTF-SHGRMPNSR 297


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