BLASTX nr result

ID: Lithospermum22_contig00032683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032683
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30096.3| unnamed protein product [Vitis vinifera]              112   7e-23
ref|XP_002308898.1| condensin complex components subunit [Populu...   110   3e-22
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   102   6e-20
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...    99   6e-19
ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like ...    98   1e-18

>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score =  112 bits (279), Expect = 7e-23
 Identities = 68/150 (45%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
 Frame = -1

Query: 619  PELKSCIEEFEEKINRFHIEKRDQEATAQNAQAHQEKVDSLEGI-VAAKRDEDSVESDIA 443
            PELKSCIEEFEEK+N+FH+E+++QE TA+NAQ HQ+KV SLE + V     E+  E+D+ 
Sbjct: 1122 PELKSCIEEFEEKLNKFHVERKEQEVTARNAQVHQQKVGSLESLMVDGSTAEECQEADVV 1181

Query: 442  EEGTDGEVTDMSTSDMT----ELSGTRSEEVKSESISASGVTEPELDDDEIQSPCIPSRG 275
            E   DGEV D S   MT    ++S +R+ +V+  S  +S V E E  + EIQS  +  RG
Sbjct: 1182 E---DGEVIDPSLKGMTQSLNDVSKSRTSKVEEYSDVSSEVIESEQGESEIQSAKVHLRG 1238

Query: 274  APNSRVKKSSV--QAKNGAISTSSRGATRS 191
            +  SR KK+++  Q ++ + S S+R   RS
Sbjct: 1239 SSKSRGKKTNMKDQKRDTSTSMSTRRNLRS 1268


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  110 bits (274), Expect = 3e-22
 Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = -1

Query: 619  PELKSCIEEFEEKINRFHIEKRDQEATAQNAQAHQEKVDSLEGIVAAKRD-EDSVESDIA 443
            PELK CIEEFEEK+ +FH+EK++QE TA+NAQ HQ+K+  +EG   A+ + E S  SD+ 
Sbjct: 1196 PELKLCIEEFEEKLTKFHMEKKEQEVTARNAQIHQQKIGGMEGCAVARNEGEVSEGSDVI 1255

Query: 442  EEGTDGEVTDMSTSDMTELSGTRSEEVKSESISASGVTEPELDDDEIQSPCIPSRGAPNS 263
            E   DGE+ D S  +M + S +        S ++S VT  E D  E+Q     S+ A  S
Sbjct: 1256 E---DGEIDDPSMEEMVQSSDSEVNRSGEYSGTSSEVTGMESDGTEVQ-----SKVASKS 1307

Query: 262  RVKKSSVQAKNGAISTSSRGATRSRK 185
            R  +S V+ ++G IS SSR +TRS++
Sbjct: 1308 RATESKVKGESGDISASSRRSTRSKQ 1333


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
            condensin, putative [Ricinus communis]
          Length = 1346

 Score =  102 bits (254), Expect = 6e-20
 Identities = 60/152 (39%), Positives = 91/152 (59%), Gaps = 7/152 (4%)
 Frame = -1

Query: 619  PELKSCIEEFEEKINRFHIEKRDQEATAQNAQAHQEKVDSLEGIVAAKRDEDSVESDIAE 440
            PELK CIEEFEEK+ +FH+EK++QE TA+NAQ H++KV+++E +V A+ + +  E     
Sbjct: 1196 PELKLCIEEFEEKLQKFHMEKKEQEVTARNAQIHRQKVENVERVVMARNEGEECEGSNIN 1255

Query: 439  EGTDGEVTDMSTSDMTELSGTRSEEVKSESISASGV----TEPEL-DDDEIQSPCIPSR- 278
            E  DGEV D S   +++      +    +S   SG+    TE EL + +E+QSP +  + 
Sbjct: 1256 E--DGEVIDPSMEGISQSKNVVPDIKLDDSDGNSGISSELTETELGETEEVQSPRVTRKG 1313

Query: 277  -GAPNSRVKKSSVQAKNGAISTSSRGATRSRK 185
             G   SR KKS+       +S S+R  TRS++
Sbjct: 1314 TGTSRSRAKKSNTIDHKSGVSASTRRYTRSKQ 1345


>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
 Frame = -1

Query: 619  PELKSCIEEFEEKINRFHIEKRDQEATAQNAQAHQEKVDSLEGI-VAAKRDEDSVESDIA 443
            PELKSCIEEFEEK+N+FH+E+++QE TA+NAQ HQ+KV SLE + V     E+  E+D+ 
Sbjct: 1191 PELKSCIEEFEEKLNKFHVERKEQEVTARNAQVHQQKVGSLESLMVDGSTAEECQEADVV 1250

Query: 442  EEGTDGEVTDMSTSDMT----ELSGTRSEEVKSESISASGVTEPELDDDEIQS 296
            E   DGEV D S   MT    ++S +R+ +V+  S  +S V E E  + EIQS
Sbjct: 1251 E---DGEVIDPSLKGMTQSLNDVSKSRTSKVEEYSDVSSEVIESEQGESEIQS 1300


>ref|XP_003518970.1| PREDICTED: condensin complex subunit 1-like [Glycine max]
          Length = 1316

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 57/134 (42%), Positives = 81/134 (60%), Gaps = 8/134 (5%)
 Frame = -1

Query: 616  ELKSCIEEFEEKINRFHIEKRDQEATAQNAQAHQEKVDSLEGIVAAKRDEDSVESDIAEE 437
            ELK+CIEEFE+K+N+FH +K++QE TA+NAQ HQ+K+ S EG       ED + S+ + E
Sbjct: 1175 ELKACIEEFEDKLNKFHTDKKEQEVTARNAQIHQQKIGSREGFTVTINSEDHLSSNSSSE 1234

Query: 436  GTDGEVTDMSTSDMTELSGTRSEE---VKSESISASGVTEP-----ELDDDEIQSPCIPS 281
               GE+ D  T + T     RSE     +S S ++S +TE      E  D EIQSP + +
Sbjct: 1235 ---GEIIDAYTEEATMPLNERSESKLVSESHSGASSELTESDQGDIETRDIEIQSPQVKT 1291

Query: 280  RGAPNSRVKKSSVQ 239
            +G   SR  KS+V+
Sbjct: 1292 KGVQRSRTNKSNVK 1305


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