BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032646
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   1e-14
gb|AAB48350.1| reverse transcriptase, partial [Arabidopsis thali...    83   2e-14
pir||S65815 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NIN...    83   2e-14
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    80   2e-13
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            80   2e-13

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/78 (44%), Positives = 57/78 (73%)
 Frame = +1

Query: 7   CNILYKAITKILMGRMRGFMPEVISLSQSPFIPGRSLTDSVMILQELVQGYHKQDGIPKM 186
           C ++YK I+K+L  RM+G + EV++ +QS FIPGR + D++++  EL++GY ++   P+ 
Sbjct: 520 CTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRC 579

Query: 187 AIKVDLQKAYDMVEWESL 240
            +KVD++KAYD VEW  L
Sbjct: 580 IMKVDIRKAYDSVEWSFL 597


>gb|AAB48350.1| reverse transcriptase, partial [Arabidopsis thaliana]
          Length = 198

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +1

Query: 7   CNILYKAITKILMGRMRGFMPEVISLSQSPFIPGRSLTDSVMILQELVQGYHKQDGIPK- 183
           CN+L+KAITK ++GRM+G M ++I  +QS FIPGR  TD+++++QE V    K+ G+   
Sbjct: 66  CNVLFKAITKTMVGRMKGVMQKLIGPAQSSFIPGRLSTDNIVVVQEAVHPMRKKKGVMGW 125

Query: 184 MAIKVDLQKAYDMVEWESL 240
           M +K+DL+KAYD + W+ L
Sbjct: 126 MLLKLDLEKAYDRIRWDFL 144


>pir||S65815 RNA-directed DNA polymerase (EC 2.7.7.49) (clone NING13) -
           Arabidopsis thaliana retrotransposon Ta28 (fragment)
          Length = 183

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/79 (48%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +1

Query: 7   CNILYKAITKILMGRMRGFMPEVISLSQSPFIPGRSLTDSVMILQELVQGYHKQDGIPK- 183
           CN+L+KAITK ++GRM+G M ++I  +QS FIPGR  TD+++++QE V    K+ G+   
Sbjct: 60  CNVLFKAITKTMVGRMKGVMQKLIGPAQSSFIPGRLSTDNIVVVQEAVHPMRKKKGVMGW 119

Query: 184 MAIKVDLQKAYDMVEWESL 240
           M +K+DL+KAYD + W+ L
Sbjct: 120 MLLKLDLEKAYDRIRWDFL 138


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 36/78 (46%), Positives = 55/78 (70%)
 Frame = +1

Query: 7    CNILYKAITKILMGRMRGFMPEVISLSQSPFIPGRSLTDSVMILQELVQGYHKQDGIPKM 186
            CN+LYKAI+K+L  R++  +PE I+ +QS FI  R L +++++  ELV+ YHK    P+ 
Sbjct: 801  CNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRC 860

Query: 187  AIKVDLQKAYDMVEWESL 240
            A+K+DL KA+D V+W  L
Sbjct: 861  AMKIDLSKAFDSVQWPFL 878


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/75 (48%), Positives = 55/75 (73%)
 Frame = +1

Query: 10  NILYKAITKILMGRMRGFMPEVISLSQSPFIPGRSLTDSVMILQELVQGYHKQDGIPKMA 189
           N LYK I+K+L  R++G +  VI  SQS F+PGRSL ++V++  E+V GY++ +  P+  
Sbjct: 390 NTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGM 449

Query: 190 IKVDLQKAYDMVEWE 234
           +KVDL+KA+D V+WE
Sbjct: 450 LKVDLKKAFDSVKWE 464