BLASTX nr result

ID: Lithospermum22_contig00032594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00032594
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514322.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06
ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago ...    54   1e-05

>ref|XP_002514322.1| conserved hypothetical protein [Ricinus communis]
           gi|223546778|gb|EEF48276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
 Frame = -2

Query: 389 EAQRWGNLQASMII---------GTVILQRQGLDEAPGRGGTVSVLKRCICSPTKHPGSF 237
           E QRW  L+A  ++                 G  +A G GG++   K C+CSPT+HPGSF
Sbjct: 16  EEQRWLLLRAVQLVTEQAGTETANAAAASAAGSADAGGGGGSI---KMCVCSPTRHPGSF 72

Query: 236 RCRYHHHSFVW 204
           RCR+HH  + W
Sbjct: 73  RCRHHHVDYAW 83


>ref|XP_002324414.1| predicted protein [Populus trichocarpa] gi|222865848|gb|EEF02979.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 20/38 (52%), Positives = 26/38 (68%)
 Frame = -2

Query: 311 APGRGGTVSVLKRCICSPTKHPGSFRCRYHHHSFVWRG 198
           A G       +K+C+CSPT+HPGSFRCR+H   +VW G
Sbjct: 39  ATGSSAVAGSIKKCLCSPTRHPGSFRCRHHRSDYVWGG 76


>ref|XP_002331146.1| predicted protein [Populus trichocarpa] gi|222873229|gb|EEF10360.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 311 APGRGGTVS-VLKRCICSPTKHPGSFRCRYHHHSFVWRG 198
           A G G  +S  + +C+CSPT+HPGSFRCR+H   +VW G
Sbjct: 38  AAGGGSAISRSINKCLCSPTRHPGSFRCRHHRSDYVWSG 76


>ref|XP_003629642.1| hypothetical protein MTR_8g083460 [Medicago truncatula]
           gi|357521031|ref|XP_003630804.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
           gi|355523664|gb|AET04118.1| hypothetical protein
           MTR_8g083460 [Medicago truncatula]
           gi|355524826|gb|AET05280.1| hypothetical protein
           MTR_8g103600 [Medicago truncatula]
          Length = 83

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = -2

Query: 302 RGGTVSVLKRCICSPTKHPGSFRCRYHHHSFVWR 201
           R G    +K+C+CSP+KHPGSFRCR H   +VWR
Sbjct: 45  RAGEDGSIKQCVCSPSKHPGSFRCRQHQAKYVWR 78


Top