BLASTX nr result

ID: Lithospermum22_contig00031846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031846
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...    86   2e-14
ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...    78   4e-12
ref|XP_003632967.1| PREDICTED: zinc finger CCCH domain-containin...    77   9e-12
emb|CBI30597.3| unnamed protein product [Vitis vinifera]               77   9e-12

>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
            predicted protein [Populus trichocarpa]
          Length = 669

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 101/336 (30%), Positives = 144/336 (42%), Gaps = 37/336 (11%)
 Frame = -3

Query: 898  KGDPGFH-------VFRGHERWPISSGGQ------KMSSLSTSWKRDPSQI--QKCL--- 773
            K DPGF        +    ++WP +  G       + SS S S   D S +  QK L   
Sbjct: 293  KDDPGFSSSFKDVGIENFRQQWPATDYGSYTSLINRGSSFSFSSSFDTSLLGSQKLLDSD 352

Query: 772  -ASHAEYQASETSYFHRYSLESSGSGSRNHPTNQNAEYNTRLIGN-WEPSIPFRPSHIIT 599
             AS +       S F     ES    S      ++AE+ T++  N WEPS+PFRPS  IT
Sbjct: 353  RASRSSSLLQSASAFSGSEPESLSLASVPGDQLRHAEHKTKISSNDWEPSVPFRPSFFIT 412

Query: 598  QRILSGA-KICDRIHDSAEQTQMRDKFSQCEQDAFGES-NNVYAKPHVKAAGTFFPGYGS 425
              ++S A    D + DS     + DK  +    + G S +N   +P     G        
Sbjct: 413  PEMISSAGSKYDPLRDSFVLPNVGDKSFKFSFFSLGASISNTSQQP---IYGDSLSNRNF 469

Query: 424  GTSFISGSNFYSKEIQ--------------KDSSNIQCVNAET-TAEKQRSSLLIEKESS 290
            GT F    +  S   +              KDS     V     TA+ +  S L E+ +S
Sbjct: 470  GTEFNGDKSTISSHDKPHGSLSDKNCSTPGKDSFTTATVTGGAGTADGENGSALKEESAS 529

Query: 289  LNSTESRTIVEADMEDVNDSEPCTDRQSHTTLPKIDSAREDNYTDVDLKSDANAHKESKG 110
                +    V   ++   D+ P TD   H    K DS R++N  +VD K   +  KESK 
Sbjct: 530  GIGYDKVNRVTNKID--RDARPQTDGSRHKKDLKADSVRQNNDMEVDQKIGGDTQKESKV 587

Query: 109  LKIFHAALVERVKELLRHPWRDGLLRKDVYKLIVKK 2
            L+ F +AL++ VK+LL+  WR+G L KD +  IVKK
Sbjct: 588  LRHFRSALIDFVKDLLKPTWREGHLSKDAHNTIVKK 623


>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
            [Glycine max]
          Length = 713

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 81/287 (28%), Positives = 124/287 (43%), Gaps = 27/287 (9%)
 Frame = -3

Query: 781  KCLASHAEYQASETSYFHRYSLESSGSG-------SRNHPTNQNAEYNTRLIG-NWEPSI 626
            K L +  EY  S++++        SGSG       S +   +  A Y +++   +WEPS+
Sbjct: 403  KFLNTDKEYLTSKSTF--------SGSGREDFSLVSSSRVPSYPAGYKSKICSYDWEPSV 454

Query: 625  PFRPSHIITQ-RILSGAKICDRIHDSAEQTQMRDKFSQCEQDAFGESNNVYAKPHVKAAG 449
            PFRPS  IT   + S   + D + DS E   + D     +       +NV     V+  G
Sbjct: 455  PFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGD--GSLKASLLIHGSNVQVSSQVRTYG 512

Query: 448  TFFPGYGSGTSFISGSNFYSKEIQKDSSNIQCVNAETTAEKQRSSLLIEKESSLNSTE-- 275
                      S + G +     +  D S++   N     E  ++ L  EK+     TE  
Sbjct: 513  D---------SAVVGEHM--SNLNDDKSSVSSHNKFCENEPNKNCLPHEKDCLPPETEIT 561

Query: 274  -----------SRTIVEADM-EDVNDSEPCTDRQ----SHTTLPKIDSAREDNYTDVDLK 143
                         T   AD  ++  D   C  R+    S     ++D  ++++  DVD +
Sbjct: 562  SGTYQGKMGMGQHTFGVADSTKNERDVTECDARRHGEGSGHKKKRVDRDKKNHEMDVDFQ 621

Query: 142  SDANAHKESKGLKIFHAALVERVKELLRHPWRDGLLRKDVYKLIVKK 2
             D +  KESK LK F AALV+ VKELL+  W +G L KD + +IVKK
Sbjct: 622  IDGSIQKESKALKFFRAALVDHVKELLKPAWHEGHLSKDAHIMIVKK 668


>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 16/237 (6%)
 Frame = -3

Query: 664  YNTRLIGNWEPSIPFRPSHIITQRILSGAK-ICDRIHDSAEQTQMRDKFSQCEQDAFGES 488
            Y  +   NWEPS+PFRPS  IT   +S  + + D + +S E   + D     +       
Sbjct: 616  YTLKTRSNWEPSVPFRPSFFITSMNVSSPRDLYDPLRNSIEIPNIGD--GSLKASLLIRG 673

Query: 487  NNVYAKPHVK------AAGTFFPGYGSGTSFISGSN-FYSKEIQKDSSNIQCVNAETTAE 329
            ++V A   V+      A G          S +S  + FY  E  + S         T AE
Sbjct: 674  SSVQASSQVRTYDDSAAVGKQMSDVNDDKSSVSSHHKFYENEPNRSSVPRGKDCLATKAE 733

Query: 328  KQRSSLLIEKESSLNSTESRTIVEADMEDV-----NDSEPCTDRQSHTTLPKIDSAREDN 164
                +    +   +   +    VE  +E +     +D+   +D   H    K +   +DN
Sbjct: 734  ITSGTCANYQNGDIGVGQYAFGVEDRIETLKKRTEHDARHHSDESEH----KKNRVAKDN 789

Query: 163  Y---TDVDLKSDANAHKESKGLKIFHAALVERVKELLRHPWRDGLLRKDVYKLIVKK 2
                 +VD ++D +  KE+K LKIFHA LV+ VKELL+  W +G L KD + LIVKK
Sbjct: 790  KFHEMEVDFQTDGSVLKETKTLKIFHAVLVDLVKELLKPFWHEGRLSKDAHILIVKK 846


>ref|XP_003632967.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Vitis vinifera]
          Length = 489

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 10/224 (4%)
 Frame = -3

Query: 643 NWEPSIPFRPSHIITQRILSGAK-ICDRIHDSAEQTQMRDKFSQCEQDAFGES------N 485
           +WEPSIPFRPS+      +S A+ + D + D+ E+  + D+  +      G S       
Sbjct: 217 DWEPSIPFRPSYFSAFTDMSSARSVHDTVGDTCEEHPLGDRPYKVSCPTQGASILGSSHQ 276

Query: 484 NVYAKPHVKAAGTFFPGYGSGTSFIS-GSNFYSKEIQKDSSNIQCVNAETTAEKQRSSLL 308
            VY  P +   GT  P Y +    I     F    + K     Q        E   SS+ 
Sbjct: 277 RVYHDPVLP--GTLGPEYNADIESIHIHDKFDQSTLDKGVYGHQRDFFTNETEPAGSSVA 334

Query: 307 IEKESSLNSTESRTIVEADMEDVNDSEP--CTDRQSHTTLPKIDSAREDNYTDVDLKSDA 134
             ++S L   E +      +EDV+D  P   +D  SH    K++  ++ N    D K D 
Sbjct: 335 ELQDSQLK--EGKPDGHTRVEDVSDQNPRNYSDGASHEEELKMEWGKQSNAKCDDHKIDE 392

Query: 133 NAHKESKGLKIFHAALVERVKELLRHPWRDGLLRKDVYKLIVKK 2
           +  KESK L+ F   L++ +K+L+R  W  G L KD +  IVK+
Sbjct: 393 DVQKESKALRHFRFVLIDFIKDLVRPTWHRGQLSKDAHNSIVKR 436


>emb|CBI30597.3| unnamed protein product [Vitis vinifera]
          Length = 745

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 10/224 (4%)
 Frame = -3

Query: 643  NWEPSIPFRPSHIITQRILSGAK-ICDRIHDSAEQTQMRDKFSQCEQDAFGES------N 485
            +WEPSIPFRPS+      +S A+ + D + D+ E+  + D+  +      G S       
Sbjct: 473  DWEPSIPFRPSYFSAFTDMSSARSVHDTVGDTCEEHPLGDRPYKVSCPTQGASILGSSHQ 532

Query: 484  NVYAKPHVKAAGTFFPGYGSGTSFIS-GSNFYSKEIQKDSSNIQCVNAETTAEKQRSSLL 308
             VY  P +   GT  P Y +    I     F    + K     Q        E   SS+ 
Sbjct: 533  RVYHDPVLP--GTLGPEYNADIESIHIHDKFDQSTLDKGVYGHQRDFFTNETEPAGSSVA 590

Query: 307  IEKESSLNSTESRTIVEADMEDVNDSEP--CTDRQSHTTLPKIDSAREDNYTDVDLKSDA 134
              ++S L   E +      +EDV+D  P   +D  SH    K++  ++ N    D K D 
Sbjct: 591  ELQDSQLK--EGKPDGHTRVEDVSDQNPRNYSDGASHEEELKMEWGKQSNAKCDDHKIDE 648

Query: 133  NAHKESKGLKIFHAALVERVKELLRHPWRDGLLRKDVYKLIVKK 2
            +  KESK L+ F   L++ +K+L+R  W  G L KD +  IVK+
Sbjct: 649  DVQKESKALRHFRFVLIDFIKDLVRPTWHRGQLSKDAHNSIVKR 692


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