BLASTX nr result
ID: Lithospermum22_contig00031835
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00031835
(506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 147 4e-40
emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group] 140 8e-39
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 143 4e-38
gb|AAX96125.1| retrotransposon protein, putative, unclassified [... 144 4e-38
ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group] g... 143 4e-38
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 147 bits (372), Expect(2) = 4e-40
Identities = 64/132 (48%), Positives = 95/132 (71%)
Frame = -2
Query: 505 SAFWQELFTKLGIKLHFSTSYHPQSDGQTERVNQCSENYLRCMIGNKPKDWCKWLSLAEY 326
S F+QE+F ++L FST+YHPQ+DGQTERVNQC E+YLRCM +P++WC W++LAE+
Sbjct: 680 STFFQEVFKSQKVQLRFSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEW 739
Query: 325 *YNITYHSALKQTPFEALYGYKPPVLAMSNYLREVDSGAEVLLQDRAKMIQLIKENLLQA 146
YN TYH+A++ TPF+ALYGY PP ++ + +V A V L+++ ++Q +K ++ A
Sbjct: 740 WYNTTYHTAIQMTPFKALYGYSPPQISEFSVPCDVSQEARVTLEEKETIVQKLKASMEDA 799
Query: 145 QNRMKVITDKKK 110
Q RMK D+ +
Sbjct: 800 QRRMKYYADRNR 811
Score = 42.0 bits (97), Expect(2) = 4e-40
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -3
Query: 117 KKKIKRTF*EGEHVYLKLQPYRQNFVSLRKHLKLAPKYY 1
+ + +R G+ VYLKLQPYRQN +R LKL KYY
Sbjct: 809 RNRTERKLEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYY 847
>emb|CAH66715.1| OSIGBa0118P15.5 [Oryza sativa Indica Group]
Length = 1434
Score = 140 bits (352), Expect(2) = 8e-39
Identities = 66/137 (48%), Positives = 90/137 (65%)
Frame = -2
Query: 505 SAFWQELFTKLGIKLHFSTSYHPQSDGQTERVNQCSENYLRCMIGNKPKDWCKWLSLAEY 326
S +Q +F +G L FSTSYHPQSDGQTERVNQC E YLRCM+ +P+DW KWL AE+
Sbjct: 1175 SDLFQNVFKSMGTTLRFSTSYHPQSDGQTERVNQCVEAYLRCMVFQEPRDWHKWLPTAEW 1234
Query: 325 *YNITYHSALKQTPFEALYGYKPPVLAMSNYLREVDSGAEVLLQDRAKMIQLIKENLLQA 146
YN +YH++L+ TP+EALYG PP V + Q R +++ +K+NLL+A
Sbjct: 1235 WYNTSYHTSLQVTPYEALYGVHPPQNGEQAIPGNVTEEIRITAQQREELMLRLKDNLLRA 1294
Query: 145 QNRMKVITDKKKD*KNF 95
QNR+K D+ + ++F
Sbjct: 1295 QNRIKKFADRLRSERSF 1311
Score = 45.4 bits (106), Expect(2) = 8e-39
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3
Query: 105 KRTF*EGEHVYLKLQPYRQNFVSLRKHLKLAPKYY 1
+R+F EG+ VYLK+QPYRQN LR LKL K+Y
Sbjct: 1308 ERSFQEGDMVYLKMQPYRQNTFGLRGSLKLRAKFY 1342
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 143 bits (360), Expect(2) = 4e-38
Identities = 70/137 (51%), Positives = 91/137 (66%)
Frame = -2
Query: 505 SAFWQELFTKLGIKLHFSTSYHPQSDGQTERVNQCSENYLRCMIGNKPKDWCKWLSLAEY 326
S W++LF + G KLH+S++YHPQSDGQTERVNQC E YLRC + + P W WL LAEY
Sbjct: 1249 SQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHLAEY 1308
Query: 325 *YNITYHSALKQTPFEALYGYKPPVLAMSNYLREVDSGAEVLLQDRAKMIQLIKENLLQA 146
YN TYHS+L TPFE LYGY P +S+ + V L+DR M QL++++L +A
Sbjct: 1309 WYNSTYHSSLGTTPFEVLYGYPPNHFGISSRDCAIPE-LSVWLRDRKFMQQLVQQHLHRA 1367
Query: 145 QNRMKVITDKKKD*KNF 95
Q +MK DKK+ + F
Sbjct: 1368 QQQMKHFADKKRSFRQF 1384
Score = 40.0 bits (92), Expect(2) = 4e-38
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3
Query: 117 KKKIKRTF*EGEHVYLKLQPYRQNFVSLRKHLKLAPKYY 1
KK+ R F G+ VYLKLQPY Q+ V+ R + KLA KYY
Sbjct: 1377 KKRSFRQFTIGDWVYLKLQPYVQSSVAPRANHKLAFKYY 1415
>gb|AAX96125.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77550700|gb|ABA93497.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 1448
Score = 144 bits (362), Expect(2) = 4e-38
Identities = 71/137 (51%), Positives = 91/137 (66%)
Frame = -2
Query: 505 SAFWQELFTKLGIKLHFSTSYHPQSDGQTERVNQCSENYLRCMIGNKPKDWCKWLSLAEY 326
S FW++LF + KLH ST+YHPQ+DGQTERVNQC E YLRC + P W WL LAEY
Sbjct: 1109 SNFWEQLFQSVSTKLHMSTAYHPQTDGQTERVNQCLETYLRCFTHSCPSKWSTWLYLAEY 1168
Query: 325 *YNITYHSALKQTPFEALYGYKPPVLAMSNYLREVDSGAEVLLQDRAKMIQLIKENLLQA 146
YN TYHS L+QTPFE LYG+ P L +S E+ + L +R M+QL++++L QA
Sbjct: 1169 WYNTTYHSTLEQTPFEVLYGHTPNQLGISVNSCELPD-VQQWLSERRLMMQLLQQHLHQA 1227
Query: 145 QNRMKVITDKKKD*KNF 95
Q MK DKK+ ++F
Sbjct: 1228 QQYMKTPADKKRSFRSF 1244
Score = 39.3 bits (90), Expect(2) = 4e-38
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = -3
Query: 117 KKKIKRTF*EGEHVYLKLQPYRQNFVSLRKHLKLAPKYY 1
KK+ R+F G+ VYLKLQPY Q+ V+ R + KL+ KY+
Sbjct: 1237 KKRSFRSFAVGDWVYLKLQPYVQSSVAARANHKLSFKYF 1275
>ref|NP_001175365.1| Os08g0123950 [Oryza sativa Japonica Group]
gi|255678117|dbj|BAH94093.1| Os08g0123950, partial
[Oryza sativa Japonica Group]
Length = 783
Score = 143 bits (360), Expect(2) = 4e-38
Identities = 68/138 (49%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Frame = -2
Query: 505 SAFWQELFTKLGIKLHFSTSYHPQSDGQTERVNQCSENYLRCMIGNKPKDWCKWLSLAEY 326
S W++LF + G KLH+S++YHPQSDGQTER NQC E YL+C + + P W WL LAEY
Sbjct: 434 SQLWEQLFLRSGTKLHYSSAYHPQSDGQTERGNQCLEIYLKCFVQSAPSKWPSWLHLAEY 493
Query: 325 *YNITYHSALKQTPFEALYGYKPPVLAMSNYLREVDSGAEVL-LQDRAKMIQLIKENLLQ 149
YN +YHS + +TPFEALYGY P +S +R+ D+ + +QDR M QL++++L +
Sbjct: 494 WYNNSYHSTIDRTPFEALYGYPPRHFGIS--IRDCDNSELITWMQDRKLMQQLVQQHLHR 551
Query: 148 AQNRMKVITDKKKD*KNF 95
AQ +MK+ DKK+ + F
Sbjct: 552 AQQQMKLFADKKRSFRQF 569
Score = 40.0 bits (92), Expect(2) = 4e-38
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = -3
Query: 117 KKKIKRTF*EGEHVYLKLQPYRQNFVSLRKHLKLAPKYY 1
KK+ R F GE VYLKLQPY Q+ V+ R + KLA KY+
Sbjct: 562 KKRSFRQFQVGEWVYLKLQPYVQSSVAPRANHKLAFKYF 600