BLASTX nr result
ID: Lithospermum22_contig00031800
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00031800
(628 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max] 144 1e-32
ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max] 144 1e-32
ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis s... 144 1e-32
ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis s... 144 1e-32
ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatul... 144 2e-32
>ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 1000
Score = 144 bits (364), Expect = 1e-32
Identities = 70/85 (82%), Positives = 76/85 (89%)
Frame = +1
Query: 370 YSMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRK 549
+S DQYGSRFIQQKLETA+ EEKTK+ PEI+PHAR LMT VFGNYVIQKF EH T+SQRK
Sbjct: 659 FSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTDSQRK 718
Query: 550 ELASQLIGHVQPLTLQMYGCRVIQK 624
ELASQL GHV PL+LQMYGCRVIQK
Sbjct: 719 ELASQLTGHVLPLSLQMYGCRVIQK 743
Score = 63.5 bits (153), Expect = 3e-08
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 13/121 (10%)
Frame = +2
Query: 2 QYQSPIYSSSG------SFHPHNM---YQANHMGRSLHPVVGTGTSMYHNKRIPLESSVL 154
QY+ P+ S SG P+ + Y + S P +G+G ++ N+RI +S++
Sbjct: 549 QYELPLLSKSGLTNGFYGSQPYGLGMPYSGKQIANSTLPSLGSGNPLFENERISRLNSMM 608
Query: 155 KKS--GSAGSWNAKAETSAQGP-AASLLEELKN-NSRSLELSDVMGHVTEFRYAKHSS*F 322
+ S GS GSW+A + +G A+SLL+E KN +R EL D++ HV +F ++ S F
Sbjct: 609 RSSVGGSGGSWHADIGNNIEGRFASSLLDEFKNKKTRPFELPDIIDHVVQFSTDQYGSRF 668
Query: 323 I 325
I
Sbjct: 669 I 669
>ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 983
Score = 144 bits (364), Expect = 1e-32
Identities = 70/85 (82%), Positives = 76/85 (89%)
Frame = +1
Query: 370 YSMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRK 549
+S DQYGSRFIQQKLETA+ EEKTK+ PEI+PHAR LMT VFGNYVIQKF EH TESQRK
Sbjct: 660 FSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTESQRK 719
Query: 550 ELASQLIGHVQPLTLQMYGCRVIQK 624
ELA+QL GHV PL+LQMYGCRVIQK
Sbjct: 720 ELANQLTGHVLPLSLQMYGCRVIQK 744
Score = 62.0 bits (149), Expect = 9e-08
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Frame = +2
Query: 2 QYQSPIYSSSG------SFHPHNM---YQANHMGRSLHPVVGTGTSMYHNKRIPLESSVL 154
QY+ P+ S SG P+ + Y + S P +G+G ++ N+RI +S++
Sbjct: 550 QYELPLLSKSGLTNGFYGSQPYGLGMPYSGKQIANSTLPSLGSGNPLFENERISRLNSMM 609
Query: 155 KKS--GSAGSWNAKAETSAQGP-AASLLEELKN-NSRSLELSDVMGHVTEFRYAKHSS*F 322
+ S GS GSW+A + +G A SLL+E KN +R EL D++ HV +F ++ S F
Sbjct: 610 RSSMGGSGGSWHADICNNIEGRFAPSLLDEFKNKKTRPFELPDIIDHVVQFSTDQYGSRF 669
Query: 323 I 325
I
Sbjct: 670 I 670
>ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 144 bits (363), Expect = 1e-32
Identities = 70/85 (82%), Positives = 74/85 (87%)
Frame = +1
Query: 370 YSMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRK 549
+SMDQYGSRFIQQKLETA EEKTK+ PEI+PHAR LMT VFGNYVIQKF EH T SQRK
Sbjct: 666 FSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTASQRK 725
Query: 550 ELASQLIGHVQPLTLQMYGCRVIQK 624
ELA QL GHV PL+LQMYGCRVIQK
Sbjct: 726 ELAEQLSGHVLPLSLQMYGCRVIQK 750
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +1
Query: 373 SMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRKE 552
S+ YG R IQ+ LE E++T+M+ E+ + GN+VIQK +E + + +
Sbjct: 739 SLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQF 798
Query: 553 LASQLIGHVQPLTLQMYGCRVIQKV 627
+ S G V L+ YGCRVIQ+V
Sbjct: 799 IISAFYGQVLALSTHPYGCRVIQRV 823
>ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 144 bits (363), Expect = 1e-32
Identities = 70/85 (82%), Positives = 74/85 (87%)
Frame = +1
Query: 370 YSMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRK 549
+SMDQYGSRFIQQKLETA EEKTK+ PEI+PHAR LMT VFGNYVIQKF EH T SQRK
Sbjct: 666 FSMDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTASQRK 725
Query: 550 ELASQLIGHVQPLTLQMYGCRVIQK 624
ELA QL GHV PL+LQMYGCRVIQK
Sbjct: 726 ELAEQLSGHVLPLSLQMYGCRVIQK 750
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/85 (36%), Positives = 47/85 (55%)
Frame = +1
Query: 373 SMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRKE 552
S+ YG R IQ+ LE E++T+M+ E+ + GN+VIQK +E + + +
Sbjct: 739 SLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVRDQNGNHVIQKCIECIPQERIQF 798
Query: 553 LASQLIGHVQPLTLQMYGCRVIQKV 627
+ S G V L+ YGCRVIQ+V
Sbjct: 799 IISAFYGQVLALSTHPYGCRVIQRV 823
>ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4
[Medicago truncatula]
Length = 1176
Score = 144 bits (362), Expect = 2e-32
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 370 YSMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRK 549
+S DQYGSRFIQQKLETA+ EEKTK+ PEI+PHAR LMT VFGNYVIQKF EH T+SQRK
Sbjct: 650 FSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDSQRK 709
Query: 550 ELASQLIGHVQPLTLQMYGCRVIQK 624
ELA+QL GHV PL+LQMYGCRVIQK
Sbjct: 710 ELANQLTGHVLPLSLQMYGCRVIQK 734
Score = 57.8 bits (138), Expect = 2e-06
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Frame = +2
Query: 2 QYQSPIYSSSGSFH-------PHNM---YQANHMGRSLHPVVGTGTSMYHNKRIPLESSV 151
QY+ P+ S SG + P+ + + + S P +G+G ++ N++I +S+
Sbjct: 539 QYELPLLSKSGLLNQGLFGSQPYGLGMPHSGKQISNSSLPSLGSGNPLFENEQISHINSM 598
Query: 152 LKKS--GSAGSWNAKAETSAQGP-AASLLEELKNN-SRSLELSDVMGHVTEFRYAKHSS* 319
++ S GS SW+A + + A+SLL+E KNN ++ ELSD++ HV +F ++ S
Sbjct: 599 MRSSLGGSGSSWHADIGNNMESRFASSLLDEFKNNKTKPFELSDIIDHVVQFSTDQYGSR 658
Query: 320 FI 325
FI
Sbjct: 659 FI 660
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = +1
Query: 373 SMDQYGSRFIQQKLETATCEEKTKMLPEIMPHARNLMTHVFGNYVIQKFLEHATESQRKE 552
S+ YG R IQ+ LE +++++M+ E+ + GN+VIQK +E +++ +
Sbjct: 723 SLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVRDQNGNHVIQKCIESVPQNRIQF 782
Query: 553 LASQLIGHVQPLTLQMYGCRVIQKV 627
+ + G V L+ YGCRVIQ+V
Sbjct: 783 IITSFYGQVVALSTHPYGCRVIQRV 807