BLASTX nr result

ID: Lithospermum22_contig00031777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031777
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [S...   130   9e-29
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   125   5e-27
emb|CBI23503.3| unnamed protein product [Vitis vinifera]              120   9e-26
ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   112   4e-23
sp|O05000.2|NU2M_ARATH RecName: Full=NADH-ubiquinone oxidoreduct...   105   5e-21

>ref|XP_002439577.1| hypothetical protein SORBIDRAFT_09g014016 [Sorghum bicolor]
           gi|241944862|gb|EES18007.1| hypothetical protein
           SORBIDRAFT_09g014016 [Sorghum bicolor]
          Length = 100

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/87 (75%), Positives = 68/87 (78%)
 Frame = +3

Query: 210 WI*ESLCEPXXXXXXXXXXXXXXXXXCSVVLGPTHPICSMIYGSTGATHFDQLAKILTGY 389
           WI ESLCEP                 CSVV+GPTHPICSMIYGSTGATHFDQLAKILTGY
Sbjct: 6   WIFESLCEPYAVRVARTVRRGVRVYTCSVVVGPTHPICSMIYGSTGATHFDQLAKILTGY 65

Query: 390 EITGARSSGIFMGILFIAVGFLFKITA 470
           EITGARSSGIFMGILFIAVG LF+ITA
Sbjct: 66  EITGARSSGIFMGILFIAVGSLFQITA 92


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/84 (76%), Positives = 65/84 (77%)
 Frame = +3

Query: 219 ESLCEPXXXXXXXXXXXXXXXXXCSVVLGPTHPICSMIYGSTGATHFDQLAKILTGYEIT 398
           ESLCEP                 CSVV+GPTHPICSMIYGSTGATHFDQLAKILTGYEIT
Sbjct: 91  ESLCEPYAVRVARTVTRGVRVYTCSVVVGPTHPICSMIYGSTGATHFDQLAKILTGYEIT 150

Query: 399 GARSSGIFMGILFIAVGFLFKITA 470
           GARSSGIFMGIL IAVG LFKITA
Sbjct: 151 GARSSGIFMGILSIAVGSLFKITA 174


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  120 bits (302), Expect = 9e-26
 Identities = 72/136 (52%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
 Frame = +3

Query: 72  MPPWFGRKPSR--YIR*AKERPPFHSAWGTQV*SXXXXXXXXXXXXXXWI*ESLCEPXXX 245
           MPPWF R+     Y R  K+ PPFHS WGT V                            
Sbjct: 1   MPPWFWRRSQADTYDRRRKD-PPFHSTWGTGV---------------------------- 31

Query: 246 XXXXXXXXXXXXXXCSVVLGPTHPICSMIYGSTGATHFDQLAKILTGYEITGARSSGIFM 425
                          SV +GPTHPICSMIYGSTGATHFDQLAKILTGYEITGARSSG+FM
Sbjct: 32  ----------RVYTYSVRVGPTHPICSMIYGSTGATHFDQLAKILTGYEITGARSSGLFM 81

Query: 426 GILFIAVGFLFKITAE 473
           GIL I VGFL KITA+
Sbjct: 82  GILSIPVGFLLKITAK 97


>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = -1

Query: 356 VGSSSRPIDHGTNRVGRPKDHTTRIGANPPRYRTCDSHRIRLAQRLLNPSQAFSSTSPLL 177
           +GSS RPIDHGTNRVGRP  HTTRI ANPPRYRTCDSHRIRLAQRLLNPS+AFSST PL 
Sbjct: 1   MGSSCRPIDHGTNRVGRPNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQ 60

Query: 176 SN 171
           S+
Sbjct: 61  SS 62



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/89 (53%), Positives = 54/89 (60%)
 Frame = -3

Query: 294 HYTYRREPPSLPYVRLSPHTARTKTPKSIPSLFFHLSSPLQSSIKLAFPRRYEMGVFPSP 115
           H+T R +     Y     H  R       PS  F  + PLQSSIKLAF RR EMGVFPSP
Sbjct: 20  HHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEMGVFPSP 79

Query: 114 IVCIGLASFQTKEAFWRTHACRKADDYIS 28
           IVCIGLAS ++K  + R  ACRKAD YIS
Sbjct: 80  IVCIGLASSRSK-LYLRARACRKADHYIS 107


>sp|O05000.2|NU2M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
          Length = 499

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/54 (94%), Positives = 52/54 (96%)
 Frame = +3

Query: 321 CSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGILFIAVGFLFKITAEKYH 482
           CSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGILFIAVGFLFKITA  +H
Sbjct: 194 CSMIYGSTGATHFDQLAKILTGYEITGARSSGIFMGILFIAVGFLFKITAVPFH 247


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