BLASTX nr result
ID: Lithospermum22_contig00031762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00031762
(703 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2... 299 4e-79
ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containi... 282 5e-74
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi... 267 2e-69
ref|XP_002532374.1| basic helix-loop-helix-containing protein, p... 267 2e-69
ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containi... 265 7e-69
>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
predicted protein [Populus trichocarpa]
Length = 933
Score = 299 bits (765), Expect = 4e-79
Identities = 133/233 (57%), Positives = 180/233 (77%)
Frame = +3
Query: 3 YIYNAIIGAFIRCFQPVQSIRFYMKMLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGH 182
++YNA+I F++ +QPVQ++ Y++MLR V PTS+TFP ++K CG + L EAVHGH
Sbjct: 46 FVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGH 105
Query: 183 IWRHGFVSNMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTA 362
+WR+GF S++FVQT+LVDFYSS+G+I+ S VFD MP RD+FAWTT+VS ++ GD+ +A
Sbjct: 106 VWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSA 165
Query: 363 LEFFDQMTEKNAASWNTMIHGYAKIGDVESAKCLFQRMPEKDLISWTTMINCYSQNQRYS 542
FD M ++N A+WNT+I GYA++ +V+ A+ LF +MP +D+ISWTTMINCYSQN+R+
Sbjct: 166 GRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFR 225
Query: 543 EALEIFTEMKDKGIKPDVVTMTTIISACAHLGVADQGKEMHLYLMQEGFEIDV 701
EAL +F EM GI PD VTM T+ISACAHLG D GKE+H Y+MQ GF +DV
Sbjct: 226 EALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDV 278
Score = 85.5 bits (210), Expect = 9e-15
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 39/190 (20%)
Frame = +3
Query: 207 NMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQMT 386
N+ L+D Y+ L ++D++ +F+ MP RD+ +WTT+++ Y Q+ AL F++M
Sbjct: 176 NLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMA 235
Query: 387 EKNAAS-------------------------WNTMIHG--------------YAKIGDVE 449
+ + + M HG YAK G ++
Sbjct: 236 KHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLD 295
Query: 450 SAKCLFQRMPEKDLISWTTMINCYSQNQRYSEALEIFTEMKDKGIKPDVVTMTTIISACA 629
+ +F ++ EK+L W ++I + + EAL +F +M+ + IKP+ VT +++SAC
Sbjct: 296 RSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACN 355
Query: 630 HLGVADQGKE 659
H G+ ++G++
Sbjct: 356 HAGLIEEGRK 365
Score = 83.2 bits (204), Expect = 5e-14
Identities = 48/200 (24%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Frame = +3
Query: 54 QSIRFYMKMLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGHIWRHGFVSNMFVQTALV 233
+++ + +M + + P T ++ C +LGAL LG+ +H +I +HGF ++++ +AL+
Sbjct: 226 EALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALI 285
Query: 234 DFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQMTEK----NAA 401
D Y+ G +D S +F + +++F W +++ G AL FD+M + N
Sbjct: 286 DMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGV 345
Query: 402 SWNTMIHGYAKIGDVESAKCLFQRMPEKDLI-----SWTTMINCYSQNQRYSEALEIFTE 566
++ +++ G +E + F M I + M++ S+ EAL++
Sbjct: 346 TFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRT 405
Query: 567 MKDKGIKPDVVTMTTIISAC 626
MK ++P+ V ++S C
Sbjct: 406 MK---LEPNAVIWGALLSGC 422
>ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 282 bits (721), Expect = 5e-74
Identities = 125/232 (53%), Positives = 174/232 (75%)
Frame = +3
Query: 6 IYNAIIGAFIRCFQPVQSIRFYMKMLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGHI 185
++NA+I + C Q++ YM MLR+ V PTS++F ++K C L GEAVHGH+
Sbjct: 43 VFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHV 102
Query: 186 WRHGFVSNMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTAL 365
W+HGF S++FVQT L++FYS+ G + SR VFD MP RD+FAWTT++SA+++ GD+ +A
Sbjct: 103 WKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAG 162
Query: 366 EFFDQMTEKNAASWNTMIHGYAKIGDVESAKCLFQRMPEKDLISWTTMINCYSQNQRYSE 545
FD+M EKN A+WN MI GY K+G+ ESA+ LF +MP +D+ISWTTM+NCYS+N+RY E
Sbjct: 163 RLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKE 222
Query: 546 ALEIFTEMKDKGIKPDVVTMTTIISACAHLGVADQGKEMHLYLMQEGFEIDV 701
+ +F ++ DKG+ PD VTMTT+ISACAHLG GKE+HLYL+ +GF++DV
Sbjct: 223 VIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDV 274
Score = 82.4 bits (202), Expect = 8e-14
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 39/198 (19%)
Frame = +3
Query: 207 NMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQMT 386
N+ A++D Y LG + + +F+ MP RD+ +WTT+++ Y ++ + F +
Sbjct: 172 NVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVI 231
Query: 387 EKNAAS---------------------------------------WNTMIHGYAKIGDVE 449
+K +++I YAK G ++
Sbjct: 232 DKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSID 291
Query: 450 SAKCLFQRMPEKDLISWTTMINCYSQNQRYSEALEIFTEMKDKGIKPDVVTMTTIISACA 629
A +F ++ K+L W +I+ + + EAL +F EM+ K I+P+ VT +I++AC
Sbjct: 292 MALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACT 351
Query: 630 HLGVADQGKEMHLYLMQE 683
H G ++G+ + ++Q+
Sbjct: 352 HAGFIEEGRRWFMSMVQD 369
Score = 75.5 bits (184), Expect = 1e-11
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Frame = +3
Query: 99 PTSFTFPPIVKGCGYLGALVLGEAVHGHIWRHGFVSNMFVQTALVDFYSSLGKIDISREV 278
P T ++ C +LGAL LG+ VH ++ GF ++++ ++L+D Y+ G ID++ V
Sbjct: 237 PDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLV 296
Query: 279 FDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQMTEK----NAASWNTMIHGYAKIGDV 446
F + +++F W ++ G + AL F +M K NA ++ +++ G +
Sbjct: 297 FYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFI 356
Query: 447 ESAKCLFQRMPEKDLIS-----WTTMINCYSQNQRYSEALEIFTEMKDKGIKPDVVTMTT 611
E + F M + I+ + M++ S+ +ALE+ M ++P+
Sbjct: 357 EEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMT---VEPNSFIWGA 413
Query: 612 IISAC 626
+++ C
Sbjct: 414 LLNGC 418
>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 267 bits (682), Expect = 2e-69
Identities = 124/234 (52%), Positives = 175/234 (74%), Gaps = 1/234 (0%)
Frame = +3
Query: 3 YIYNAIIGAFIRCFQPVQSIRFYMKMLRDQ-VRPTSFTFPPIVKGCGYLGALVLGEAVHG 179
++YNA+I F+ C P ++++ Y+ ML + V PTS+TF +VK C ++ A+ LG+ VH
Sbjct: 200 FVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHC 259
Query: 180 HIWRHGFVSNMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGT 359
HIW+ GF S++FVQTALVDFYS L + +R+VFD M RD FAWT +VSA + GD+ +
Sbjct: 260 HIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDS 319
Query: 360 ALEFFDQMTEKNAASWNTMIHGYAKIGDVESAKCLFQRMPEKDLISWTTMINCYSQNQRY 539
A + F++M E+N A+WNTMI GYA++G+VESA+ LF +MP KD+ISWTTMI CYSQN++Y
Sbjct: 320 ARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQY 379
Query: 540 SEALEIFTEMKDKGIKPDVVTMTTIISACAHLGVADQGKEMHLYLMQEGFEIDV 701
+AL I++EM+ GI PD VTM+T+ SACAH+G + GKE+H Y+M +G +DV
Sbjct: 380 QDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDV 433
Score = 78.2 bits (191), Expect = 1e-12
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 39/198 (19%)
Frame = +3
Query: 207 NMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFF---- 374
N ++D Y+ LG ++ + +F+ MP +D+ +WTT+++ Y Q+ AL +
Sbjct: 331 NTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMR 390
Query: 375 ------DQMTEKNAAS-----------------------------WNTMIHGYAKIGDVE 449
D++T AS + ++ YAK G ++
Sbjct: 391 LNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLD 450
Query: 450 SAKCLFQRMPEKDLISWTTMINCYSQNQRYSEALEIFTEMKDKGIKPDVVTMTTIISACA 629
+ +F ++ +K+L W +I + + +AL +F M+ + I P+ VT +I+SAC
Sbjct: 451 LSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACT 510
Query: 630 HLGVADQGKEMHLYLMQE 683
H G+ D+G+ L + ++
Sbjct: 511 HAGLVDEGRSRFLSMTRD 528
Score = 73.9 bits (180), Expect = 3e-11
Identities = 44/215 (20%), Positives = 99/215 (46%), Gaps = 9/215 (4%)
Frame = +3
Query: 9 YNAIIGAFIRCFQPVQSIRFYMKMLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGHIW 188
+ +I + + Q ++ Y +M + + P T + C ++GAL LG+ +H ++
Sbjct: 366 WTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVM 425
Query: 189 RHGFVSNMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALE 368
G ++++ +ALVD Y+ G +D+S +F + ++++ W ++ G AL
Sbjct: 426 SQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALR 485
Query: 369 FFDQMTEK----NAASWNTMIHGYAKIGDVESAKCLFQRMP-----EKDLISWTTMINCY 521
F M + N ++ +++ G V+ + F M D+ + M++
Sbjct: 486 MFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDML 545
Query: 522 SQNQRYSEALEIFTEMKDKGIKPDVVTMTTIISAC 626
S++ +EALE+ M+ +P+ + +++ C
Sbjct: 546 SKSGYLNEALELIKSME---FEPNSIIWGALLNGC 577
>ref|XP_002532374.1| basic helix-loop-helix-containing protein, putative [Ricinus
communis] gi|223527930|gb|EEF30017.1| basic
helix-loop-helix-containing protein, putative [Ricinus
communis]
Length = 310
Score = 267 bits (682), Expect = 2e-69
Identities = 118/208 (56%), Positives = 162/208 (77%)
Frame = +3
Query: 78 MLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGHIWRHGFVSNMFVQTALVDFYSSLGK 257
MLR ++ P+S+TF ++K CG + GE VHGH+WRHG S++FVQTALVDFYS++G+
Sbjct: 1 MLRSKILPSSYTFSSLIKACGLASEVKFGEVVHGHVWRHGLESHVFVQTALVDFYSTVGR 60
Query: 258 IDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQMTEKNAASWNTMIHGYAKI 437
I S++VFD MP RD+FAW T+V++ + GD+ +A FD M EKN A+WNT+I+GY+K+
Sbjct: 61 IIESKKVFDEMPERDIFAWATMVTSLARIGDMSSARRLFDMMPEKNTAAWNTLIYGYSKL 120
Query: 438 GDVESAKCLFQRMPEKDLISWTTMINCYSQNQRYSEALEIFTEMKDKGIKPDVVTMTTII 617
D+ESA+ LF +M E+D+ISWTTM+NCY+QN+++ EAL +F +M GI PD VTM T+I
Sbjct: 121 RDLESAEFLFSQMHERDIISWTTMVNCYAQNKKFGEALVVFNQMIKTGICPDEVTMATVI 180
Query: 618 SACAHLGVADQGKEMHLYLMQEGFEIDV 701
SACAHLG D GKE+HLY+MQ GF++DV
Sbjct: 181 SACAHLGALDLGKEIHLYVMQNGFDLDV 208
Score = 77.0 bits (188), Expect = 3e-12
Identities = 37/150 (24%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Frame = +3
Query: 54 QSIRFYMKMLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGHIWRHGFVSNMFVQTALV 233
+++ + +M++ + P T ++ C +LGAL LG+ +H ++ ++GF ++++ ++L+
Sbjct: 156 EALVVFNQMIKTGICPDEVTMATVISACAHLGALDLGKEIHLYVMQNGFDLDVYIGSSLI 215
Query: 234 DFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQM----TEKNAA 401
D Y+ G +D S VF + +++F W +++ G ALE F +M + N
Sbjct: 216 DMYAKCGSLDRSLLVFFKLQEKNLFCWNSVIEGLAAHGYAKEALEMFRKMGREKIKPNGV 275
Query: 402 SWNTMIHGYAKIGDVESAKCLFQRMPEKDL 491
++ ++++ A G VE L ++ PE+ +
Sbjct: 276 TFISVLNACAHAGLVEEGLALRKKAPERGI 305
>ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 265 bits (677), Expect = 7e-69
Identities = 122/208 (58%), Positives = 160/208 (76%)
Frame = +3
Query: 78 MLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGHIWRHGFVSNMFVQTALVDFYSSLGK 257
M++ QV PTSFTF +VK C + L GEAVHGHIW++GF S++FVQTALVDFY + GK
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 258 IDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQMTEKNAASWNTMIHGYAKI 437
I +R VFD M RD+FAWTT++S + ++GD+ +A + FD+M +N ASWN MI GY+++
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRL 120
Query: 438 GDVESAKCLFQRMPEKDLISWTTMINCYSQNQRYSEALEIFTEMKDKGIKPDVVTMTTII 617
+VESA+ LF +MP +D+ISWTTMI CYSQN+++ EAL +F EM+ GI PD VTM TII
Sbjct: 121 RNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 618 SACAHLGVADQGKEMHLYLMQEGFEIDV 701
SACAHLG D GKE+HLY M+ GF++DV
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDV 208
Score = 80.1 bits (196), Expect = 4e-13
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 39/200 (19%)
Frame = +3
Query: 201 VSNMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALEFFDQ 380
V N A++D YS L ++ + +F MP RD+ +WTT+++ Y Q+ AL F++
Sbjct: 104 VRNTASWNAMIDGYSRLRNVESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNE 163
Query: 381 MT---------------------------------------EKNAASWNTMIHGYAKIGD 443
M + + + +I YAK G
Sbjct: 164 MQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGS 223
Query: 444 VESAKCLFQRMPEKDLISWTTMINCYSQNQRYSEALEIFTEMKDKGIKPDVVTMTTIISA 623
++ + +F ++ +K+L W ++I + + EAL +F+ M+ + IKP+ VT +++ A
Sbjct: 224 LDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGA 283
Query: 624 CAHLGVADQGKEMHLYLMQE 683
C H G+ ++G++ L + ++
Sbjct: 284 CTHAGLVEEGRKRFLSMSRD 303
Score = 71.2 bits (173), Expect = 2e-10
Identities = 46/215 (21%), Positives = 99/215 (46%), Gaps = 9/215 (4%)
Frame = +3
Query: 9 YNAIIGAFIRCFQPVQSIRFYMKMLRDQVRPTSFTFPPIVKGCGYLGALVLGEAVHGHIW 188
+ +I + + Q +++ + +M + + P T I+ C +LGAL LG+ +H +
Sbjct: 141 WTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEIHLYAM 200
Query: 189 RHGFVSNMFVQTALVDFYSSLGKIDISREVFDSMPIRDMFAWTTLVSAYIQSGDLGTALE 368
GF ++++ +AL+D Y+ G +D S VF + +++F W +++ G AL
Sbjct: 201 EMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYAEEALA 260
Query: 369 FFDQMTEK----NAASWNTMIHGYAKIGDVESAKCLFQRMPE-----KDLISWTTMINCY 521
F +M + N ++ +++ G VE + F M ++ + M++
Sbjct: 261 MFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGCMVDLL 320
Query: 522 SQNQRYSEALEIFTEMKDKGIKPDVVTMTTIISAC 626
+ +ALE+ M+ ++P+ V ++ C
Sbjct: 321 GKAGLLEDALELVRSMR---MEPNSVIWGALLGGC 352