BLASTX nr result

ID: Lithospermum22_contig00031716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031716
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...   226   5e-57
ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...   226   5e-57
gb|AFK34889.1| unknown [Medicago truncatula]                          225   8e-57
ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot...   222   7e-56
ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|2...   221   2e-55

>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score =  226 bits (576), Expect = 5e-57
 Identities = 116/186 (62%), Positives = 141/186 (75%)
 Frame = +3

Query: 207 MAKYYDIDDILAEEEVVPTVFKKEAVGVEQIDSGDDSNKVEAGSKVELPYWLASELYLRN 386
           MA YYD+DDIL EEE+V  +F+K A GV  ID   +++ +EAGSKVELP+WLA EL LR 
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 387 VVSITIPSCYERKSRTREEIGADPAHVDLRSRCLYFYEFGSKIARLVGDKTIGPLLLVAF 566
            VS+ +P C+ +K  TR EI AD A VDLRSRC YFYEFG KIA +VGD+TIG LLL AF
Sbjct: 61  AVSVNVPPCFNQK--TRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAF 118

Query: 567 RARYKDVLIKALTAALAVPPKYLSILTKEETKLYEAGQSSTAAFKKWRIGGPRLQRASLL 746
           + RYK+VL KA TAA+A   K+ +ILT EE  LYE  QS+ A+FKKWR+GGPR Q AS+L
Sbjct: 119 KNRYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASIL 178

Query: 747 GKKRKP 764
           G+KRKP
Sbjct: 179 GRKRKP 184


>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  226 bits (576), Expect = 5e-57
 Identities = 117/186 (62%), Positives = 141/186 (75%)
 Frame = +3

Query: 207 MAKYYDIDDILAEEEVVPTVFKKEAVGVEQIDSGDDSNKVEAGSKVELPYWLASELYLRN 386
           MA YY+ID+I+ EEE+V  VF+K A GV  +D   ++N VE GSKVELP+WLA EL  R 
Sbjct: 1   MAHYYNIDEIIVEEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQ 60

Query: 387 VVSITIPSCYERKSRTREEIGADPAHVDLRSRCLYFYEFGSKIARLVGDKTIGPLLLVAF 566
            V+I +P+C+ +K  TR+EI AD   VDLRSRC YFYE G K+A LVGD+TIG LLL AF
Sbjct: 61  AVTIHVPACFNQK--TRKEIQADAPCVDLRSRCPYFYELGCKVAPLVGDRTIGSLLLQAF 118

Query: 567 RARYKDVLIKALTAALAVPPKYLSILTKEETKLYEAGQSSTAAFKKWRIGGPRLQRASLL 746
            +RYK+VL KA TAA    PK L++LTKEET LYE  QSS AAFKKWR+GGPR QRAS+L
Sbjct: 119 LSRYKEVLSKAHTAASTPVPKVLTLLTKEETNLYETAQSSMAAFKKWRMGGPRFQRASVL 178

Query: 747 GKKRKP 764
           G+KRKP
Sbjct: 179 GRKRKP 184


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score =  225 bits (574), Expect = 8e-57
 Identities = 115/186 (61%), Positives = 141/186 (75%)
 Frame = +3

Query: 207 MAKYYDIDDILAEEEVVPTVFKKEAVGVEQIDSGDDSNKVEAGSKVELPYWLASELYLRN 386
           MA YYD+DDIL EEE+V  +F+K A GV  ID   +++ +EAGSKVELP+WLA EL LR 
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 387 VVSITIPSCYERKSRTREEIGADPAHVDLRSRCLYFYEFGSKIARLVGDKTIGPLLLVAF 566
            VS+ +P C+ +K+R   EI AD A VDLRSRC YFYEFG KIA +VGD+TIG LLL AF
Sbjct: 61  AVSVNVPPCFNQKARL--EIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAF 118

Query: 567 RARYKDVLIKALTAALAVPPKYLSILTKEETKLYEAGQSSTAAFKKWRIGGPRLQRASLL 746
           + RYK+VL KA TAA+A   K+ +ILT EE  LYE  QS+ A+FKKWR+GGPR Q AS+L
Sbjct: 119 KNRYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASIL 178

Query: 747 GKKRKP 764
           G+KRKP
Sbjct: 179 GRKRKP 184


>ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis
           sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA
           replication complex GINS protein PSF3-like [Cucumis
           sativus]
          Length = 189

 Score =  222 bits (566), Expect = 7e-56
 Identities = 115/185 (62%), Positives = 139/185 (75%)
 Frame = +3

Query: 207 MAKYYDIDDILAEEEVVPTVFKKEAVGVEQIDSGDDSNKVEAGSKVELPYWLASELYLRN 386
           M  YYDIDDILAEEE+V  VF+K   GV  ID   +++ VE+GSKVELP+WLA EL+LR 
Sbjct: 5   MTSYYDIDDILAEEELVSVVFQKAVNGVG-IDPSSETDSVESGSKVELPFWLAQELHLRQ 63

Query: 387 VVSITIPSCYERKSRTREEIGADPAHVDLRSRCLYFYEFGSKIARLVGDKTIGPLLLVAF 566
           V  + +PSC+ +  RTR EI AD A VDLRSRC +FYEFG KIA LVGD+TIG  LL   
Sbjct: 64  VAVMALPSCFNQ--RTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTL 121

Query: 567 RARYKDVLIKALTAALAVPPKYLSILTKEETKLYEAGQSSTAAFKKWRIGGPRLQRASLL 746
           ++RYK+VL KA +A  A   KYL++L+KEETK+YEA QSS  AFKKWR+GGPR QRAS L
Sbjct: 122 KSRYKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFL 181

Query: 747 GKKRK 761
            +KRK
Sbjct: 182 SRKRK 186


>ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|222865254|gb|EEF02385.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  221 bits (562), Expect = 2e-55
 Identities = 119/186 (63%), Positives = 140/186 (75%)
 Frame = +3

Query: 207 MAKYYDIDDILAEEEVVPTVFKKEAVGVEQIDSGDDSNKVEAGSKVELPYWLASELYLRN 386
           MA Y +IDDILAEEE VP VF+K   GV+ ID   +   VE GSK ELP+WLA EL++R 
Sbjct: 1   MANYNEIDDILAEEEFVPVVFQKAINGVK-IDESTEKGHVEQGSKTELPFWLARELHMRQ 59

Query: 387 VVSITIPSCYERKSRTREEIGADPAHVDLRSRCLYFYEFGSKIARLVGDKTIGPLLLVAF 566
            VSI++P+C+ +K  TR EI AD A VDLRSRC YFYEFG K+A L  DKTIG LL  AF
Sbjct: 60  AVSISVPACFNQK--TRLEIQADAACVDLRSRCPYFYEFGCKLAPLC-DKTIGLLLPYAF 116

Query: 567 RARYKDVLIKALTAALAVPPKYLSILTKEETKLYEAGQSSTAAFKKWRIGGPRLQRASLL 746
           R RYK++L KA T A A   K+L+ LT+EET LYEA QSS AAFKKWR+GGPRLQRAS+L
Sbjct: 117 RIRYKEILHKAHTTAFATASKFLTHLTREETSLYEAAQSSMAAFKKWRMGGPRLQRASIL 176

Query: 747 GKKRKP 764
           G+KRKP
Sbjct: 177 GRKRKP 182


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