BLASTX nr result

ID: Lithospermum22_contig00031674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031674
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26002.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   116   2e-24
ref|XP_003609866.1| Pentatricopeptide repeat-containing protein ...   114   1e-23
ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/98 (60%), Positives = 72/98 (73%)
 Frame = -1

Query: 296 KRKVWKEGEFPASNVKERSSFGYQTEXXXXXXXXXXXKLDRKNAAKAWVSTVTESLAECI 117
           K+++WK+GEFP ++ + RS                  KLDRKN AKAW +TV E+L++ +
Sbjct: 68  KKRLWKQGEFPGTSAEGRSR--------KTPIKNIKKKLDRKNDAKAWANTVAEALSDLV 119

Query: 116 DKKQWLQALQVFEMLREQPFYQPKEGTYMKLLVLLGKS 3
            KKQWLQAL+VFEMLREQPFYQPKEGTYMKLLVLLGKS
Sbjct: 120 LKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKS 157


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/98 (60%), Positives = 72/98 (73%)
 Frame = -1

Query: 296 KRKVWKEGEFPASNVKERSSFGYQTEXXXXXXXXXXXKLDRKNAAKAWVSTVTESLAECI 117
           K+++WK+GEFP ++ + RS                  KLDRKN AKAW +TV E+L++ +
Sbjct: 68  KKRLWKQGEFPGTSAEGRSR--------KTPIKNIKKKLDRKNDAKAWANTVAEALSDLV 119

Query: 116 DKKQWLQALQVFEMLREQPFYQPKEGTYMKLLVLLGKS 3
            KKQWLQAL+VFEMLREQPFYQPKEGTYMKLLVLLGKS
Sbjct: 120 LKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKS 157


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/98 (60%), Positives = 72/98 (73%)
 Frame = -1

Query: 296 KRKVWKEGEFPASNVKERSSFGYQTEXXXXXXXXXXXKLDRKNAAKAWVSTVTESLAECI 117
           K+++WK+GEFP ++ + RS                  KLDRKN AKAW +TV E+L++ +
Sbjct: 68  KKRLWKQGEFPGTSAEGRSR--------KTPIKNIKKKLDRKNDAKAWANTVAEALSDLV 119

Query: 116 DKKQWLQALQVFEMLREQPFYQPKEGTYMKLLVLLGKS 3
            KKQWLQAL+VFEMLREQPFYQPKEGTYMKLLVLLGKS
Sbjct: 120 LKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKS 157


>ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355510921|gb|AES92063.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 496

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/98 (61%), Positives = 70/98 (71%)
 Frame = -1

Query: 296 KRKVWKEGEFPASNVKERSSFGYQTEXXXXXXXXXXXKLDRKNAAKAWVSTVTESLAECI 117
           K+K WK+GEFP   V E S     +            KLDRKN AKAW +TVTE+L+ECI
Sbjct: 59  KKKHWKQGEFPG--VSETS---LPSSTRRKPIKNVKKKLDRKNNAKAWANTVTEALSECI 113

Query: 116 DKKQWLQALQVFEMLREQPFYQPKEGTYMKLLVLLGKS 3
           DKKQWLQAL+  +MLREQ FYQP+EGTYMKL+VLLGKS
Sbjct: 114 DKKQWLQALETLDMLREQSFYQPREGTYMKLIVLLGKS 151


>ref|XP_002316075.1| predicted protein [Populus trichocarpa] gi|222865115|gb|EEF02246.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/98 (58%), Positives = 68/98 (69%)
 Frame = -1

Query: 299 PKRKVWKEGEFPASNVKERSSFGYQTEXXXXXXXXXXXKLDRKNAAKAWVSTVTESLAEC 120
           PK+K WK+GEFP         F   +            KLDRK+ AKAWV+TV E+L +C
Sbjct: 10  PKKKHWKQGEFPG--------FTDASRPRRTAIKNIKKKLDRKSKAKAWVNTVAEALTDC 61

Query: 119 IDKKQWLQALQVFEMLREQPFYQPKEGTYMKLLVLLGK 6
           + KKQWLQA+QVFEML+EQPFYQPKE TYMKLLVLLG+
Sbjct: 62  VLKKQWLQAIQVFEMLKEQPFYQPKEATYMKLLVLLGR 99


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