BLASTX nr result

ID: Lithospermum22_contig00031614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031614
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi...    68   9e-10
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    67   2e-09
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    67   2e-09
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    67   2e-09
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    67   2e-09

>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
          Length = 561

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
 Frame = -3

Query: 512 ILKIPINNLNHEDSIIRSHNPRGLFIVKSTYSFIHXXXXXXXXXXXXSITQTK-----FY 348
           I  IP++ +  ED +    + RG F VKS Y                 ++  +     F+
Sbjct: 184 IKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFW 242

Query: 347 SRFWKLKIQGKIKHFLWRVIHNILLPTTTNLNIRKMEVQQTCFLCSESI*TNMHVFNTCK 168
            + WKL + GKIKHFLWR+ HN  L    NL+ R M+V   C +C        H+F  CK
Sbjct: 243 KKLWKLGVPGKIKHFLWRMCHN-TLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 301

Query: 167 FTKEVSKELMIAETSDQIRE 108
             K+V + L + E    +++
Sbjct: 302 PVKKVWQALNLEELRSMLKQ 321


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
 Frame = -3

Query: 512  ILKIPINNLNHEDSIIRSHNPRGLFIVKSTYSFIHXXXXXXXXXXXXSITQTK-----FY 348
            I  IP++ +  ED +    + RG F VKS Y                 ++  +     F+
Sbjct: 1244 IKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFW 1302

Query: 347  SRFWKLKIQGKIKHFLWRVIHNILLPTTTNLNIRKMEVQQTCFLCSESI*TNMHVFNTCK 168
             + WKL + GKIKHFLWR+ HN  L    NL+ R M+V   C +C        H+F  CK
Sbjct: 1303 KKLWKLGVPGKIKHFLWRMCHN-TLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1361

Query: 167  FTKEVSKELMIAETSDQIRE 108
              K+V + L + E    + +
Sbjct: 1362 PVKKVWQALNLEELRSMLEQ 1381


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
 Frame = -3

Query: 512  ILKIPINNLNHEDSIIRSHNPRGLFIVKSTYSFIHXXXXXXXXXXXXSITQTK-----FY 348
            I  IP++ +  ED +    + RG F VKS Y                 ++  +     F+
Sbjct: 1189 IKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFW 1247

Query: 347  SRFWKLKIQGKIKHFLWRVIHNILLPTTTNLNIRKMEVQQTCFLCSESI*TNMHVFNTCK 168
             + WKL + GKIKHFLWR+ HN  L    NL+ R M+V   C +C        H+F  CK
Sbjct: 1248 KKLWKLGVPGKIKHFLWRMCHN-TLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1306

Query: 167  FTKEVSKELMIAETSDQIRE 108
              K+V + L + E    + +
Sbjct: 1307 PVKKVWQALNLEELRSMLEQ 1326


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
 Frame = -3

Query: 512  ILKIPINNLNHEDSIIRSHNPRGLFIVKSTYSFIHXXXXXXXXXXXXSITQTK-----FY 348
            I  IP++ +  ED +    + RG F VKS Y                 ++  +     F+
Sbjct: 1185 IKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFW 1243

Query: 347  SRFWKLKIQGKIKHFLWRVIHNILLPTTTNLNIRKMEVQQTCFLCSESI*TNMHVFNTCK 168
             + WKL + GKIKHFLWR+ HN  L    NL+ R M+V   C +C        H+F  CK
Sbjct: 1244 KKLWKLGVPGKIKHFLWRMCHN-TLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCK 1302

Query: 167  FTKEVSKELMIAETSDQIRE 108
              K+V + L + E    + +
Sbjct: 1303 PVKKVWQALNLEELRSMLEQ 1322


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 5/140 (3%)
 Frame = -3

Query: 512 ILKIPINNLNHEDSIIRSHNPRGLFIVKSTYSFIHXXXXXXXXXXXXSITQTK-----FY 348
           I  IP++ +  ED +    + RG F VKS Y                 ++  +     F+
Sbjct: 184 IKSIPVH-VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFW 242

Query: 347 SRFWKLKIQGKIKHFLWRVIHNILLPTTTNLNIRKMEVQQTCFLCSESI*TNMHVFNTCK 168
            + WKL + GKIKHFLWR+ HN  L    NL  R M+V   C +C        H+F  CK
Sbjct: 243 KKLWKLGVPGKIKHFLWRMCHN-TLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCK 301

Query: 167 FTKEVSKELMIAETSDQIRE 108
             K+V + L + E    + +
Sbjct: 302 PVKKVWQALNLEELRSMLEQ 321


Top