BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031570
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t...    79   3e-13
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...    77   1e-12
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    76   2e-12
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    75   4e-12
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    75   6e-12

>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1098

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/102 (44%), Positives = 59/102 (57%)
 Frame = -3

Query: 312 DRISKKVIGLGEVRNGVYVFRAVPFSSASPIVVHATTSISSVLLH*RLGHPSSATLSSFP 133
           DR ++ +IG GE R GVY F  V    A+ +      S S+ L H RLGHPS+  L SFP
Sbjct: 465 DRFTRTLIGAGEEREGVYYFTGV---LAARVNKGFKESSSATLWHHRLGHPSTGVLLSFP 521

Query: 132 VFSQQNNVRNLLAHCDVCLRAKQTRIVFSLSNNKAADLFDLI 7
            F+  ++   ++  CD+C RAKQ R VFS S NK    F+LI
Sbjct: 522 EFASSSSDLEIIKSCDICYRAKQAREVFSPSLNKTTVCFELI 563


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 49/104 (47%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
 Frame = -3

Query: 312 DRISKKVIGLGEVRNGVYVFRAVPFSSASPIVVH-ATTSISSVLLH*RLGHPSSATLSSF 136
           DR SK +IG GE R GVY    V     +P  +H A       L H RLGHPS + LSS 
Sbjct: 491 DRSSKTLIGSGEERGGVYYLTDV-----TPAKIHTANVDSDQALWHQRLGHPSFSVLSSL 545

Query: 135 PVFSQQNNVRNLLAH-CDVCLRAKQTRIVFSLSNNKAADLFDLI 7
           P+FS+ ++   + +H CDVC RAKQTR VF  S NK  + F LI
Sbjct: 546 PLFSKTSST--VTSHSCDVCFRAKQTREVFPESINKTEECFSLI 587


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
 Frame = -3

Query: 312 DRISKKVIGLGEVRNGVYVFRAVPFSSASPIVVHATT--SISSVLLH*RLGHPSSATLSS 139
           DR  + +IG GE R GVY F  V     +P V  A++  +IS  L H RLGHPS++ L S
Sbjct: 461 DRFLRTLIGAGEEREGVYYFTGV----LAPRVHKASSDFAISGDLWHRRLGHPSTSVLLS 516

Query: 138 FPVFSQQNNVRNLLAHCDVCLRAKQTRIVFSLSNNKAADLFDLI 7
            P  ++ +   + +  CD C R+KQTR VF +SNNK  + F LI
Sbjct: 517 LPECNRSSQGFDKIDSCDTCFRSKQTREVFPISNNKTMECFSLI 560


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 46/102 (45%), Positives = 59/102 (57%)
 Frame = -3

Query: 312 DRISKKVIGLGEVRNGVYVFRAVPFSSASPIVVHATTSISSVLLH*RLGHPSSATLSSFP 133
           DR S+ +IG GE R+GVY        +A+  V     +    L H RLGHPS + LSS P
Sbjct: 474 DRFSRTLIGTGEERDGVYYLT----DAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLP 529

Query: 132 VFSQQNNVRNLLAHCDVCLRAKQTRIVFSLSNNKAADLFDLI 7
           +FS  +   +  + CDVC RAKQTR VF  S+NK+ D F LI
Sbjct: 530 LFSGSSCSVSSRS-CDVCFRAKQTREVFPDSSNKSTDCFSLI 570


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 46/102 (45%), Positives = 59/102 (57%)
 Frame = -3

Query: 312 DRISKKVIGLGEVRNGVYVFRAVPFSSASPIVVHATTSISSVLLH*RLGHPSSATLSSFP 133
           DR S+ +IG GE R+GVY        +A+  V     +    L H RLGHPS + LSS P
Sbjct: 474 DRFSRTLIGTGEERDGVYYLT----DAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLP 529

Query: 132 VFSQQNNVRNLLAHCDVCLRAKQTRIVFSLSNNKAADLFDLI 7
           +FS  +   +  + CDVC RAKQTR VF  S+NK+ D F LI
Sbjct: 530 LFSGSSCSVSSRS-CDVCFRAKQTREVFPDSSNKSTDCFSLI 570