BLASTX nr result

ID: Lithospermum22_contig00031538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031538
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    85   8e-15
gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    82   5e-14
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    82   7e-14
emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    79   4e-13

>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
 Frame = -1

Query: 490 WTKPDTRRFKLNVDGSSKGNPDISGGEGILRNDSGDMLFAFTRDYGRHSSLLSEFRALLE 311
           W  P   R KLNVDG SKGNP ++G  G++R+  G  +  F R+ G  SS+ +E  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYV 135

Query: 310 GLKVCLSYNIKGILIESDSKCLINMISTGS--WPWYLSAIGESIVTLMASIEAVLHHVFR 137
           GL++      + + +ESDSK ++ +I+  S       + I +    L  + E   +HV+R
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTTYHVYR 195

Query: 136 VSNSAADWLANFGV 95
            +N  ADWLAN+G+
Sbjct: 196 EANCVADWLANYGL 209


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 85.1 bits (209), Expect = 8e-15
 Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
 Frame = -1

Query: 490 WTKPDTRRFKLNVDGSSKGNPDISGGEGILRNDSGDMLFAFTRDYGRHSSLLSEFRALLE 311
           W  P   R KLNVDG SKGNP ++G  G++R+  G  +  F R+ G  SS+ +E  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYV 135

Query: 310 GLKVCLSYNIKGILIESDSKCLINMISTGS--WPWYLSAIGESIVTLMASIEAVLHHVFR 137
           GL++      + + +ESDSK ++ +I+  S       + I +    L    E   +HV+R
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRDWEVTTYHVYR 195

Query: 136 VSNSAADWLANFGV 95
            +N  ADWLAN+G+
Sbjct: 196 EANCVADWLANYGL 209


>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
 Frame = -1

Query: 493 SWTKPDTRRFKLNVDGSSKGNPDISGGEGILRNDSGDMLFAFTRDYGRHSSLLSEFRALL 314
           +W  P     K+NVDGSS GNP  +G  G++RND G  +  F+   GR S+LL E  A+L
Sbjct: 3   AWHPPTAPGLKINVDGSSFGNPGRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYAIL 62

Query: 313 EGLKVCLSYNIKGILIESDSKCLINMISTGSWPWYLSAIG-ESIVTLMASIEAVL-HHVF 140
            GL++      + I +E D K  +++I      ++  AI    I TLM+   ++L +H  
Sbjct: 63  NGLQLAWDLGFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHTL 122

Query: 139 RVSNSAADWLANFGVQ 92
           R  N  ADWLA +  Q
Sbjct: 123 REGNECADWLAKYDAQ 138


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 47/134 (35%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
 Frame = -1

Query: 490 WTKPDTRRFKLNVDGSSKGNPDISGGEGILRNDSGDMLFAFTRDYGRHSSLLSEFRALLE 311
           W  P   R KLNVDG SKGNP ++G  G++R   G  +  F R+    SS+ +E  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIREHLGAWIGGFARNIDICSSVNAELWAVYV 135

Query: 310 GLKVCLSYNIKGILIESDSKCLINMISTGS--WPWYLSAIGESIVTLMASIEAVLHHVFR 137
           GL++      + + +ESDSK ++ +I+  S       + I +    L    E   +HV+R
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKDMLGRDWEVTTYHVYR 195

Query: 136 VSNSAADWLANFGV 95
            +N  ADWLAN+G+
Sbjct: 196 EANCVADWLANYGL 209


>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 53/142 (37%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
 Frame = -1

Query: 493 SWTKPDTRRFKLNVDGSSKGNPDISGGEGILRNDSGDMLFAFTRDYGRHSSLLSEFRALL 314
           SW +P     KLN DGS KG    +GG G+LR+  G  + AF       +SL++E  AL 
Sbjct: 226 SWHRPGAGWVKLNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMAEIGALE 285

Query: 313 EGLKVCLSYNIKGILIESDSKCLINMISTGSWPWYLSAIGESIVTLMASI--------EA 158
            GL++ L  N++ ILIE DSK  I M+S            E   +LM  I        E 
Sbjct: 286 GGLRLALKLNVERILIEGDSKITIEMLSGKR-----EXTXEEEKSLMTHIRELLQGFQEV 340

Query: 157 VLHHVFRVSNSAADWLANFGVQ 92
              H FR +N  AD LAN   Q
Sbjct: 341 TARHEFREANRPADHLANIATQ 362


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