BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031505
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Popu...   277   1e-72
ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   258   9e-67
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   256   4e-66
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              256   5e-66
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   252   7e-65

>ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Populus trichocarpa]
           gi|222852929|gb|EEE90476.1| hypothetical protein
           POPTRDRAFT_562705 [Populus trichocarpa]
          Length = 406

 Score =  277 bits (709), Expect = 1e-72
 Identities = 147/258 (56%), Positives = 182/258 (70%), Gaps = 8/258 (3%)
 Frame = -3

Query: 750 DEMDNVILGEDGKPLIHTDGTGYISEDLAAKCPKEFSRASYIKDDCFQ-------NVRDL 592
           D+  N + G DGKPLIHTDGTG+IS DLA KCPK     + +K  C Q        V + 
Sbjct: 71  DKDGNAVYGTDGKPLIHTDGTGFISHDLALKCPK-----NQVKGTCLQASNIERLRVHNE 125

Query: 591 VEGLSGEDRNGEPPLLMQCRLFKDGYAVKGTLLVNKKLDPRTIQIRPSMIKVEGDPKCPI 412
           V   + E  +G+PPLL+Q RLF +G AVKGT LVNKKL+ RT+ +RPSMIKVE DPK   
Sbjct: 126 VMEQNPECLHGDPPLLIQFRLFNNGRAVKGTFLVNKKLNHRTLHVRPSMIKVETDPKLSN 185

Query: 411 K-AANSLEVVAISQKPRKAYLSKNLIALLSYGGVPEEFFQGLLMSALEETKSVFKKKRAA 235
             + NSLE+V  S +P+K +LSKNLIALLSYGGVPEEFF G+L +ALE+   +   K+AA
Sbjct: 186 TFSKNSLEIVGTSCRPKKTFLSKNLIALLSYGGVPEEFFMGILNNALEDAHGILSNKKAA 245

Query: 234 VRVAMNHGESDDSFTSARMLSVGIPLDEPYLQFRLCQLANEEKKKFRGGKIPISESYYLM 55
           +RVA+N+G+ DD+   A M+  GIPL+EPYLQ  L  L  EEKK  +GGKIP+ ESYYLM
Sbjct: 246 LRVALNYGDMDDNIV-ATMIGCGIPLEEPYLQHHLSILKKEEKKSLKGGKIPVPESYYLM 304

Query: 54  GTSDPTDTLNSDEVCVIL 1
           GT+DPT  L SDEVC+IL
Sbjct: 305 GTADPTGLLESDEVCIIL 322


>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 953

 Score =  258 bits (659), Expect = 9e-67
 Identities = 131/251 (52%), Positives = 177/251 (70%), Gaps = 8/251 (3%)
 Frame = -3

Query: 732  ILGEDGKPLIHTDGTGYISEDLAAKCPKEFSRASYIKDDCFQNVRDLVE--------GLS 577
            I+ ++ KP I TDGTG+IS DLA  CP    + S ++++C Q + +LVE        G +
Sbjct: 343  IMVDNEKPRILTDGTGFISRDLALLCPNNVYKGSNLENNCIQEINNLVELEDMSNAMGEA 402

Query: 576  GEDRNGEPPLLMQCRLFKDGYAVKGTLLVNKKLDPRTIQIRPSMIKVEGDPKCPIKAANS 397
             +    EPPLL+QCRLF  G+A+KGTLLVN+KL PRTIQ+RPSMIKVE DP   +++ NS
Sbjct: 403  EQLSTHEPPLLIQCRLFHMGHAIKGTLLVNRKLPPRTIQVRPSMIKVEKDPSVHMQSINS 462

Query: 396  LEVVAISQKPRKAYLSKNLIALLSYGGVPEEFFQGLLMSALEETKSVFKKKRAAVRVAMN 217
            LEVV  S KP++ YLSK+LIALLS+GGVP EFF  LL S +E+   V+  KR+A+R ++N
Sbjct: 463  LEVVTTSNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRASIN 522

Query: 216  HGESDDSFTSARMLSVGIPLDEPYLQFRLCQLANEEKKKFRGGKIPISESYYLMGTSDPT 37
             GE D+ + +A M+  GIPLDEP+L+  L + A EEKKK RGGK+ + + +YLMGT DPT
Sbjct: 523  CGEKDE-YNAAEMILCGIPLDEPFLKHHLSRFAREEKKKLRGGKLYMPDCFYLMGTVDPT 581

Query: 36   DTLNSDEVCVI 4
              L  ++VC+I
Sbjct: 582  GHLKKNQVCII 592


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  256 bits (654), Expect = 4e-66
 Identities = 136/251 (54%), Positives = 173/251 (68%), Gaps = 1/251 (0%)
 Frame = -3

Query: 750  DEMDNVILGEDGKPLIHTDGTGYISEDLAAKCPKEFSRASYIKDDCFQNVRDLVEGLSGE 571
            DE  +V+  ED KPLI TDGTG+ISEDLA +CP    R  Y+ +             + +
Sbjct: 348  DEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNG------------NSD 395

Query: 570  DRNGEPPLLMQCRLFKDGYAVKGTLLVNKKLDPRTIQIRPSMIKVEGDPKCP-IKAANSL 394
              +   PLL+QCRLF +G AVKGTLL+N+KL PRTIQIRPSMIKVE DPK    +  NS+
Sbjct: 396  VCDSRYPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSV 455

Query: 393  EVVAISQKPRKAYLSKNLIALLSYGGVPEEFFQGLLMSALEETKSVFKKKRAAVRVAMNH 214
            E+   S +PR++YLSK LIALLSYGGVP E+F  LL  ALE+  SV   KRAA+RV++  
Sbjct: 456  EINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRF 515

Query: 213  GESDDSFTSARMLSVGIPLDEPYLQFRLCQLANEEKKKFRGGKIPISESYYLMGTSDPTD 34
            GE DDS  + RM+  GIP+DEP+L   L  + NEE+K  R GK+P+++ +YLMGT+DPT 
Sbjct: 516  GEMDDSIVT-RMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTG 574

Query: 33   TLNSDEVCVIL 1
            TL SDEVC+IL
Sbjct: 575  TLKSDEVCIIL 585


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  256 bits (653), Expect = 5e-66
 Identities = 136/251 (54%), Positives = 170/251 (67%), Gaps = 1/251 (0%)
 Frame = -3

Query: 750  DEMDNVILGEDGKPLIHTDGTGYISEDLAAKCPKEFSRASYIKDDCFQNVRDLVEGLSGE 571
            DE  +V+  ED KPLI TDGTG+ISEDLA +CP    R  Y+ +                
Sbjct: 340  DEDGHVVYDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNN---------------- 383

Query: 570  DRNGEPPLLMQCRLFKDGYAVKGTLLVNKKLDPRTIQIRPSMIKVEGDPKCP-IKAANSL 394
                  PLL+QCRLF +G AVKGTLL+N+KL PRTIQIRPSMIKVE DPK    +  NS+
Sbjct: 384  --GNSDPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSV 441

Query: 393  EVVAISQKPRKAYLSKNLIALLSYGGVPEEFFQGLLMSALEETKSVFKKKRAAVRVAMNH 214
            E+   S +PR++YLSK LIALLSYGGVP E+F  LL  ALE+  SV   KRAA+RV++  
Sbjct: 442  EINGTSNQPRRSYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRF 501

Query: 213  GESDDSFTSARMLSVGIPLDEPYLQFRLCQLANEEKKKFRGGKIPISESYYLMGTSDPTD 34
            GE DDS  + RM+  GIP+DEP+L   L  + NEE+K  R GK+P+++ +YLMGT+DPT 
Sbjct: 502  GEMDDSIVT-RMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTG 560

Query: 33   TLNSDEVCVIL 1
            TL SDEVC+IL
Sbjct: 561  TLKSDEVCIIL 571


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  252 bits (643), Expect = 7e-65
 Identities = 132/251 (52%), Positives = 169/251 (67%), Gaps = 1/251 (0%)
 Frame = -3

Query: 750  DEMDNVILGEDGKPLIHTDGTGYISEDLAAKCPKEFSRASYIKDDCFQNVRDLVEGLSGE 571
            D+    +L ++ KP IH+DGTGYISEDLA  CP    +   ++ +  Q           E
Sbjct: 386  DQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFKGKCLRSENIQ-----------E 434

Query: 570  DRNGEPPLLMQCRLFKDGYAVKGTLLVNKKLDPRTIQIRPSMIKVEGDPKCP-IKAANSL 394
              N +PPLL+Q R+F DGYAVKGT L+NKKL PRT+Q+RPSMIKV  DP        N+L
Sbjct: 435  ACNQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNAL 494

Query: 393  EVVAISQKPRKAYLSKNLIALLSYGGVPEEFFQGLLMSALEETKSVFKKKRAAVRVAMNH 214
            EVV  S  PR+  LSKNL+ALLSYGG+P EFF  +L++ LEE+KS+F  K AA+ VA+N+
Sbjct: 495  EVVTTSNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNY 554

Query: 213  GESDDSFTSARMLSVGIPLDEPYLQFRLCQLANEEKKKFRGGKIPISESYYLMGTSDPTD 34
            GE DD   +A+M+ VGIPLDEP+L+  L  L   EK   + G++P++ESYYLMGT DPT 
Sbjct: 555  GEMDDQ-NAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLMGTVDPTG 613

Query: 33   TLNSDEVCVIL 1
             L  DEVCVIL
Sbjct: 614  ELKEDEVCVIL 624