BLASTX nr result
ID: Lithospermum22_contig00031451
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00031451
(298 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518010.1| pentatricopeptide repeat-containing protein,... 99 5e-19
emb|CBI27699.3| unnamed protein product [Vitis vinifera] 93 3e-17
ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat... 93 3e-17
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera] 92 4e-17
ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat... 91 1e-16
>ref|XP_002518010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542992|gb|EEF44528.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 824
Score = 98.6 bits (244), Expect = 5e-19
Identities = 44/98 (44%), Positives = 67/98 (68%)
Frame = +1
Query: 4 MFKNFVAETNVETSNLILSRSMDCGLSGDAHSRFERTPYKDITTWNFMVQGYAANDLPDH 183
+F+ N+ T N ++S ++CGL DA+ FE+ P D+TTWN MV+G A ND PD
Sbjct: 447 VFQTLSDNRNLVTFNSMISGYVNCGLYDDAYMIFEKMPASDLTTWNLMVRGCAENDCPDQ 506
Query: 184 ALSMFQQLQCNGMKPDNMSIMNVLPVCVQMSSIDMLKQ 297
A S+F++LQ GMKPD ++I+++LP C Q +S+ ++KQ
Sbjct: 507 AFSLFRELQARGMKPDAVTIISLLPSCAQTASVHLMKQ 544
Score = 55.8 bits (133), Expect = 3e-06
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 25 ETNVETSNLILSRSMDCGL-SGDAHSRFERTPYKDITTWNFMVQGYAANDLPDHALSMFQ 201
ET+ N ++S CGL S DA++ F+ +KD+ +WN ++ G++ N + D AL +F
Sbjct: 109 ETHTLVGNALVSMYAKCGLVSYDAYAAFQSIYHKDVVSWNAIIAGFSENKMVDSALRLFF 168
Query: 202 QLQCNGMKPDNMSIMNVLPVCVQMSS 279
+ +KP++ +I VLP+ +++
Sbjct: 169 FMLKTQIKPNHATIATVLPLLASLAT 194
>emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 92.8 bits (229), Expect = 3e-17
Identities = 44/99 (44%), Positives = 64/99 (64%)
Frame = +1
Query: 1 NMFKNFVAETNVETSNLILSRSMDCGLSGDAHSRFERTPYKDITTWNFMVQGYAANDLPD 180
N+F + + NV T N ++S ++ DA++ F D+TTWN MV+ YA ND PD
Sbjct: 449 NIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPD 508
Query: 181 HALSMFQQLQCNGMKPDNMSIMNVLPVCVQMSSIDMLKQ 297
ALS+F +LQ GMKPD ++IM++LP C M+S+ ML+Q
Sbjct: 509 QALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQ 547
Score = 57.4 bits (137), Expect = 1e-06
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 25 ETNVETSNLILSRSMDCGL-SGDAHSRFERTPYKDITTWNFMVQGYAANDLPDHALSMFQ 201
E++ N ++S CGL DA++ F R +KD+ +WN ++ G++ N + A +F
Sbjct: 112 ESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFH 171
Query: 202 QLQCNGMKPDNMSIMNVLPVCVQM 273
+ ++P+ +I ++LPVC +
Sbjct: 172 AMLKGPIQPNYATIASILPVCASL 195
>ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 92.8 bits (229), Expect = 3e-17
Identities = 44/99 (44%), Positives = 64/99 (64%)
Frame = +1
Query: 1 NMFKNFVAETNVETSNLILSRSMDCGLSGDAHSRFERTPYKDITTWNFMVQGYAANDLPD 180
N+F + + NV T N ++S ++ DA++ F D+TTWN MV+ YA ND PD
Sbjct: 510 NIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPD 569
Query: 181 HALSMFQQLQCNGMKPDNMSIMNVLPVCVQMSSIDMLKQ 297
ALS+F +LQ GMKPD ++IM++LP C M+S+ ML+Q
Sbjct: 570 QALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQ 608
Score = 57.4 bits (137), Expect = 1e-06
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 25 ETNVETSNLILSRSMDCGL-SGDAHSRFERTPYKDITTWNFMVQGYAANDLPDHALSMFQ 201
E++ N ++S CGL DA++ F R +KD+ +WN ++ G++ N + A +F
Sbjct: 173 ESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFH 232
Query: 202 QLQCNGMKPDNMSIMNVLPVCVQM 273
+ ++P+ +I ++LPVC +
Sbjct: 233 AMLKGPIQPNYATIASILPVCASL 256
>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 92.0 bits (227), Expect = 4e-17
Identities = 44/99 (44%), Positives = 63/99 (63%)
Frame = +1
Query: 1 NMFKNFVAETNVETSNLILSRSMDCGLSGDAHSRFERTPYKDITTWNFMVQGYAANDLPD 180
N+F + + NV T N ++S + DA++ F D+TTWN MV+ YA ND PD
Sbjct: 1442 NIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPD 1501
Query: 181 HALSMFQQLQCNGMKPDNMSIMNVLPVCVQMSSIDMLKQ 297
ALS+F +LQ GMKPD ++IM++LP C M+S+ ML+Q
Sbjct: 1502 QALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQ 1540
Score = 57.4 bits (137), Expect = 1e-06
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 25 ETNVETSNLILSRSMDCGL-SGDAHSRFERTPYKDITTWNFMVQGYAANDLPDHALSMFQ 201
E++ N ++S CGL DA++ F R +KD+ +WN ++ G++ N + A +F
Sbjct: 1105 ESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFH 1164
Query: 202 QLQCNGMKPDNMSIMNVLPVCVQM 273
+ ++P+ +I ++LPVC +
Sbjct: 1165 AMLKGPIQPNYATIASILPVCASL 1188
>ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Glycine max]
Length = 875
Score = 90.5 bits (223), Expect = 1e-16
Identities = 43/98 (43%), Positives = 62/98 (63%)
Frame = +1
Query: 4 MFKNFVAETNVETSNLILSRSMDCGLSGDAHSRFERTPYKDITTWNFMVQGYAANDLPDH 183
MF+N + N+ T N ++S + G DA+ F D+TTWN MV+ YA ND P+
Sbjct: 516 MFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQ 575
Query: 184 ALSMFQQLQCNGMKPDNMSIMNVLPVCVQMSSIDMLKQ 297
AL + +LQ GMKPD ++IM++LPVC QM+S+ +L Q
Sbjct: 576 ALGLCHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQ 613
Score = 57.8 bits (138), Expect = 9e-07
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +1
Query: 46 NLILSRSMDCGL-SGDAHSRFERTPYKDITTWNFMVQGYAANDLPDHALSMFQQLQCNGM 222
N ++S CGL S DA++ F+ YKD+ +WN M+ G A N L + A +F +
Sbjct: 185 NALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPT 244
Query: 223 KPDNMSIMNVLPVC 264
+P+ ++ N+LPVC
Sbjct: 245 RPNYATVANILPVC 258