BLASTX nr result

ID: Lithospermum22_contig00031433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031433
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36342.1| hypothetical protein [Ipomoea trifida]                 59   3e-07
gb|AAS79577.1| putative PHD zinc finger protein [Ipomoea trifida...    58   7e-07

>dbj|BAF36342.1| hypothetical protein [Ipomoea trifida]
          Length = 770

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 21/122 (17%)
 Frame = -3

Query: 305 SETSRNDVGVSPIRAGMKREFMAMMKAQVGYGVPVGSRRCTRSQNVSLRSGSVLKSPVRD 126
           + T   +V +S IR GMKREF  MMKAQ   G+ +G +R TRSQN SL +G    SP   
Sbjct: 3   NRTEAGEVVISSIRTGMKREFAMMMKAQAECGISIGQKRVTRSQNGSL-NGRASISPQNG 61

Query: 125 GKLET---KRRGKETKRVE------------------RGNVGGEEIVELEKVAVVSEDDE 9
            + ++   KRR KE   V                   R    GE++   EK+ + SE +E
Sbjct: 62  SRTKSSTVKRRKKEANVVTADQSLSHSNEKLDKTEELRSKDEGEKV---EKLPLTSEWEE 118

Query: 8   PK 3
           PK
Sbjct: 119 PK 120


>gb|AAS79577.1| putative PHD zinc finger protein [Ipomoea trifida]
           gi|117165997|dbj|BAF36299.1| hypothetical protein
           [Ipomoea trifida]
          Length = 1047

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 21/122 (17%)
 Frame = -3

Query: 305 SETSRNDVGVSPIRAGMKREFMAMMKAQVGYGVPVGSRRCTRSQNVSLRSGSVLKSPVRD 126
           + T   +V +S IR GMKREF  MMKAQ   G+ +G +R TRSQN +L +G    SP   
Sbjct: 3   NRTEAGEVVISSIRTGMKREFAMMMKAQAECGISIGQKRVTRSQNGAL-NGRASISPQNG 61

Query: 125 GKLET---KRRGKETKRVE------------------RGNVGGEEIVELEKVAVVSEDDE 9
            + ++   KRR KE   V                   R    GE++   EK+ + SE +E
Sbjct: 62  SRTKSSTVKRRKKEANVVTADQSLSHSNEKLDKTEELRSKDEGEKV---EKLPLTSEWEE 118

Query: 8   PK 3
           PK
Sbjct: 119 PK 120


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