BLASTX nr result

ID: Lithospermum22_contig00031392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031392
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   192   3e-47
ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ...   187   1e-45
ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] g...   187   1e-45
gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]   187   1e-45

>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  192 bits (487), Expect = 3e-47
 Identities = 90/121 (74%), Positives = 104/121 (85%)
 Frame = +3

Query: 6   DSVTFLSLLTACSHSGSIDKGQSYFDMMQKEYDIKPSLKHYGCMVDLLGRAGQLEKAYSF 185
           D VTF+SLL+ACSHSG +D+G+ +F +MQ EY IKPSLKHYGCMVDLLGRAG LE AY F
Sbjct: 577 DHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIKPSLKHYGCMVDLLGRAGFLEMAYDF 635

Query: 186 IKSMPMHPDASVWGALLGACRIHNDVELGKLASDHLLEVAPENVGYYVLLSNMYAKLGQW 365
           IK MP+HPDAS+WGALLGACRIH ++ELGK ASD L EV  ENVGYYVLLSN+YA +G+W
Sbjct: 636 IKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKW 695

Query: 366 E 368
           E
Sbjct: 696 E 696


>ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
           gi|449476583|ref|XP_004154777.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  189 bits (479), Expect = 3e-46
 Identities = 86/121 (71%), Positives = 103/121 (85%)
 Frame = +3

Query: 6   DSVTFLSLLTACSHSGSIDKGQSYFDMMQKEYDIKPSLKHYGCMVDLLGRAGQLEKAYSF 185
           D +TF+SLL+ACSHSG +D+GQ  F +MQ+ Y I+PSLKHYGCMVDL GRAG LEKA++F
Sbjct: 544 DHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNF 603

Query: 186 IKSMPMHPDASVWGALLGACRIHNDVELGKLASDHLLEVAPENVGYYVLLSNMYAKLGQW 365
           +K+MP+ PD SVWGALLGACRIH +VEL +  SDHLL+V  ENVGYYVLLSN+YAKLG W
Sbjct: 604 VKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHW 663

Query: 366 E 368
           E
Sbjct: 664 E 664


>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499957|gb|AES81160.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/121 (71%), Positives = 102/121 (84%)
 Frame = +3

Query: 6   DSVTFLSLLTACSHSGSIDKGQSYFDMMQKEYDIKPSLKHYGCMVDLLGRAGQLEKAYSF 185
           D +TF+SLL+ACSHSG +D+GQ  FD+MQKEY IKPSLKHYGCMVDLLGRAG LEKAY  
Sbjct: 526 DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYEL 585

Query: 186 IKSMPMHPDASVWGALLGACRIHNDVELGKLASDHLLEVAPENVGYYVLLSNMYAKLGQW 365
           +++MP+ PDAS+WGALL AC+I+ + ELG LASD LLEV  ENVGYYVLLSN+YA   +W
Sbjct: 586 VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKW 645

Query: 366 E 368
           E
Sbjct: 646 E 646


>ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
           gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  187 bits (474), Expect = 1e-45
 Identities = 84/121 (69%), Positives = 104/121 (85%)
 Frame = +3

Query: 6   DSVTFLSLLTACSHSGSIDKGQSYFDMMQKEYDIKPSLKHYGCMVDLLGRAGQLEKAYSF 185
           D +TF++LL+ACSHSG +D+G+  F+MMQ +Y I PSLKHYGCMVDL GRAGQLE A +F
Sbjct: 552 DHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNF 611

Query: 186 IKSMPMHPDASVWGALLGACRIHNDVELGKLASDHLLEVAPENVGYYVLLSNMYAKLGQW 365
           IKSMP+ PDAS+WGALL ACR+H +V+LGK+AS+HL EV PE+VGY+VLLSNMYA  G+W
Sbjct: 612 IKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 671

Query: 366 E 368
           E
Sbjct: 672 E 672


>gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/121 (71%), Positives = 102/121 (84%)
 Frame = +3

Query: 6   DSVTFLSLLTACSHSGSIDKGQSYFDMMQKEYDIKPSLKHYGCMVDLLGRAGQLEKAYSF 185
           D +TF+SLL+ACSHSG +D+GQ  FD+MQKEY IKPSLKHYGCMVDLLGRAG LEKAY  
Sbjct: 526 DHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYEL 585

Query: 186 IKSMPMHPDASVWGALLGACRIHNDVELGKLASDHLLEVAPENVGYYVLLSNMYAKLGQW 365
           +++MP+ PDAS+WGALL AC+I+ + ELG LASD LLEV  ENVGYYVLLSN+YA   +W
Sbjct: 586 VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKW 645

Query: 366 E 368
           E
Sbjct: 646 E 646


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