BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031382
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21038.3| unnamed protein product [Vitis vinifera]              322   3e-86
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   322   3e-86
ref|XP_002324295.1| rna-dependent RNA polymerase [Populus tricho...   317   1e-84
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   315   5e-84
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   314   8e-84

>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  322 bits (825), Expect = 3e-86
 Identities = 152/196 (77%), Positives = 176/196 (89%)
 Frame = +3

Query: 3   LKYICACKQPVDDAFQKLKSVQMWLAKNPKLFEVPRELDDIVEVRRLIITPTKAYCLPPE 182
           LK+IC+ + PV DA+Q+LK V  WL KNPKL + P+ELDDIVEVRRL+ITP+KAYCLPPE
Sbjct: 210 LKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPE 269

Query: 183 VELSNRVLRNYKHIADRFLRVTFMDEGMQTLNKGVLSYYAAPIVREITSNSNPQRTLLFK 362
           VELSNRVLRNYK ++DRFLRVTFMDEGMQT+N  VL+YY APIV+ ITSNS PQ+T +FK
Sbjct: 270 VELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFK 329

Query: 363 RVRSTLTEGFYLCGRKYSFLAFSANQLRDRSAWFFAEDQKVGVLSIKSWMGKFTNRNIAK 542
           RV++ LT+GFYLCGRKYSFLAFS+NQLRDRSAWFFAED+K  V +IKSWMGKFTNRN+AK
Sbjct: 330 RVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAK 389

Query: 543 CAARIGQCFSSTYATV 590
           CAAR+GQCFSSTYATV
Sbjct: 390 CAARMGQCFSSTYATV 405


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  322 bits (825), Expect = 3e-86
 Identities = 152/196 (77%), Positives = 176/196 (89%)
 Frame = +3

Query: 3   LKYICACKQPVDDAFQKLKSVQMWLAKNPKLFEVPRELDDIVEVRRLIITPTKAYCLPPE 182
           LK+IC+ + PV DA+Q+LK V  WL KNPKL + P+ELDDIVEVRRL+ITP+KAYCLPPE
Sbjct: 372 LKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLVITPSKAYCLPPE 431

Query: 183 VELSNRVLRNYKHIADRFLRVTFMDEGMQTLNKGVLSYYAAPIVREITSNSNPQRTLLFK 362
           VELSNRVLRNYK ++DRFLRVTFMDEGMQT+N  VL+YY APIV+ ITSNS PQ+T +FK
Sbjct: 432 VELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVITSNSFPQKTRVFK 491

Query: 363 RVRSTLTEGFYLCGRKYSFLAFSANQLRDRSAWFFAEDQKVGVLSIKSWMGKFTNRNIAK 542
           RV++ LT+GFYLCGRKYSFLAFS+NQLRDRSAWFFAED+K  V +IKSWMGKFTNRN+AK
Sbjct: 492 RVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAK 551

Query: 543 CAARIGQCFSSTYATV 590
           CAAR+GQCFSSTYATV
Sbjct: 552 CAARMGQCFSSTYATV 567


>ref|XP_002324295.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1200

 Score =  317 bits (811), Expect = 1e-84
 Identities = 146/196 (74%), Positives = 176/196 (89%)
 Frame = +3

Query: 3   LKYICACKQPVDDAFQKLKSVQMWLAKNPKLFEVPRELDDIVEVRRLIITPTKAYCLPPE 182
           LK+IC  ++PV +A+++LK+VQ WL KNP LF+ P++L D+VE+RRL+ITPTKAYCLPPE
Sbjct: 373 LKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPE 432

Query: 183 VELSNRVLRNYKHIADRFLRVTFMDEGMQTLNKGVLSYYAAPIVREITSNSNPQRTLLFK 362
           VELSNRVLR YK +ADRFLRVTFMDEG+Q +N  VL+YY APIVR+ITSNS PQ+T +FK
Sbjct: 433 VELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFK 492

Query: 363 RVRSTLTEGFYLCGRKYSFLAFSANQLRDRSAWFFAEDQKVGVLSIKSWMGKFTNRNIAK 542
           RVRS LTEGFYLCGR+YSFLAFSANQLRD+SAWFF+E++ + VL +KSWMGKFTNRNIAK
Sbjct: 493 RVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAK 552

Query: 543 CAARIGQCFSSTYATV 590
           CAAR+GQCFSSTYAT+
Sbjct: 553 CAARMGQCFSSTYATI 568


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  315 bits (806), Expect = 5e-84
 Identities = 152/196 (77%), Positives = 173/196 (88%)
 Frame = +3

Query: 3   LKYICACKQPVDDAFQKLKSVQMWLAKNPKLFEVPRELDDIVEVRRLIITPTKAYCLPPE 182
           LK++ + K PV+DA QKL  +Q WL KNPKL E   ELDDIVEVRRL+ITPTKAYCLPP 
Sbjct: 370 LKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPT 429

Query: 183 VELSNRVLRNYKHIADRFLRVTFMDEGMQTLNKGVLSYYAAPIVREITSNSNPQRTLLFK 362
           VELSNRVLRNYKH+ADRFLRVTFMDEGM+ LN+ VL+YYAA IVREITSNSNPQRT +F+
Sbjct: 430 VELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQ 489

Query: 363 RVRSTLTEGFYLCGRKYSFLAFSANQLRDRSAWFFAEDQKVGVLSIKSWMGKFTNRNIAK 542
           RV+S L++GF+LCGRKYSFLAFSANQLRDRSAWFFAED K+ V  I SWMG+F+NRN+AK
Sbjct: 490 RVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549

Query: 543 CAARIGQCFSSTYATV 590
           CAAR+GQCFSSTYATV
Sbjct: 550 CAARMGQCFSSTYATV 565


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  314 bits (804), Expect = 8e-84
 Identities = 152/196 (77%), Positives = 172/196 (87%)
 Frame = +3

Query: 3   LKYICACKQPVDDAFQKLKSVQMWLAKNPKLFEVPRELDDIVEVRRLIITPTKAYCLPPE 182
           LK++ + K PV+DA QKL  +Q WL KNPKL E   ELDDIVEVRRL+ITPTKAYCLPP 
Sbjct: 370 LKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVITPTKAYCLPPT 429

Query: 183 VELSNRVLRNYKHIADRFLRVTFMDEGMQTLNKGVLSYYAAPIVREITSNSNPQRTLLFK 362
           VELSNRVLRNYKH+ADRFLRVTFMDEGM+ LN+ VL+YYAA IVREITSNSNPQRT +F+
Sbjct: 430 VELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSNSNPQRTAIFQ 489

Query: 363 RVRSTLTEGFYLCGRKYSFLAFSANQLRDRSAWFFAEDQKVGVLSIKSWMGKFTNRNIAK 542
           RV+S L+ GF+LCGRKYSFLAFSANQLRDRSAWFFAED K+ V  I SWMG+F+NRN+AK
Sbjct: 490 RVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAK 549

Query: 543 CAARIGQCFSSTYATV 590
           CAAR+GQCFSSTYATV
Sbjct: 550 CAARMGQCFSSTYATV 565