BLASTX nr result

ID: Lithospermum22_contig00031236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031236
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   116   3e-24
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   105   6e-21
ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloro...   102   6e-20
ref|NP_181342.1| uncharacterized protein [Arabidopsis thaliana] ...    98   2e-18

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  116 bits (291), Expect = 3e-24
 Identities = 66/135 (48%), Positives = 82/135 (60%)
 Frame = -3

Query: 655 PHRSSFSCDKHPDEKFSGFCPSCLCERLITLDQXXXXXXXXXXXXXXXXXXXXXXXXSAA 476
           PHRSSF+CD+HPDE F+GFCPSCLCERL  LDQ                        +AA
Sbjct: 17  PHRSSFACDRHPDEHFTGFCPSCLCERLAGLDQ------SSSARKSTSNSIATSSTAAAA 70

Query: 475 IKSLFSKNKESSNVINSSVLPPKPLKNVSFLHELRRSKSFSASKNDVVGLNLEPQRRSCD 296
           +K++F  +    +  NS     KP  + SF  ELRR+KSFSASK +     +EPQR+SCD
Sbjct: 71  LKAIFKGSGGGPDKSNS--YRHKPSSSSSFFPELRRTKSFSASKGEGFSGVVEPQRKSCD 128

Query: 295 VRVRNTLSTLFTLEN 251
           VRVRNTL TLF L++
Sbjct: 129 VRVRNTLWTLFNLDD 143


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score =  107 bits (266), Expect = 3e-21
 Identities = 61/135 (45%), Positives = 79/135 (58%)
 Frame = -3

Query: 655 PHRSSFSCDKHPDEKFSGFCPSCLCERLITLDQXXXXXXXXXXXXXXXXXXXXXXXXSAA 476
           PHR S SCD+HP+E F+GFCPSCLCERL  LD                          AA
Sbjct: 18  PHRHSTSCDRHPEEHFTGFCPSCLCERLAVLDPNTSSAASSSSSRKPTAT--------AA 69

Query: 475 IKSLFSKNKESSNVINSSVLPPKPLKNVSFLHELRRSKSFSASKNDVVGLNLEPQRRSCD 296
           +K++F  ++ SS+  N++       K+ SF  ELRR+KSFSASKN+      EPQR+SCD
Sbjct: 70  LKAIFKPSQLSSSSNNNNNNNNNNNKSSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCD 129

Query: 295 VRVRNTLSTLFTLEN 251
           VR R TL +LFT ++
Sbjct: 130 VRERYTLWSLFTQDD 144


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  105 bits (263), Expect = 6e-21
 Identities = 61/135 (45%), Positives = 78/135 (57%)
 Frame = -3

Query: 655 PHRSSFSCDKHPDEKFSGFCPSCLCERLITLDQXXXXXXXXXXXXXXXXXXXXXXXXSAA 476
           PHR S SCD+HP+E F+GFCPSCLCERL  LD                         +AA
Sbjct: 13  PHRPSTSCDRHPEEHFTGFCPSCLCERLAVLD--------PNTSSAASSSSSRKPTATAA 64

Query: 475 IKSLFSKNKESSNVINSSVLPPKPLKNVSFLHELRRSKSFSASKNDVVGLNLEPQRRSCD 296
           +K++F   + SS+  N++          SF  ELRR+KSFSASKN+      EPQR+SCD
Sbjct: 65  LKAIFKPPQPSSSNNNNN------SSKSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCD 118

Query: 295 VRVRNTLSTLFTLEN 251
           VRVRNTL +LF  ++
Sbjct: 119 VRVRNTLWSLFNQDS 133


>ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 656

 Score =  102 bits (254), Expect = 6e-20
 Identities = 61/134 (45%), Positives = 75/134 (55%)
 Frame = -3

Query: 655 PHRSSFSCDKHPDEKFSGFCPSCLCERLITLDQXXXXXXXXXXXXXXXXXXXXXXXXSAA 476
           PHR S SCD+HP E F+GFCPSCLCERL  LD                         +AA
Sbjct: 23  PHRPSTSCDRHPQENFTGFCPSCLCERLAVLD------PNSSSTSSAARKPPTSSTAAAA 76

Query: 475 IKSLFSKNKESSNVINSSVLPPKPLKNVSFLHELRRSKSFSASKNDVVGLNLEPQRRSCD 296
           +K++F  +  + N       PP      SFL ELRR+KSFSASKN+ +    EPQR+SCD
Sbjct: 77  LKAIFRPSIAARN------RPPPS----SFLPELRRTKSFSASKNEALSGFFEPQRKSCD 126

Query: 295 VRVRNTLSTLFTLE 254
           VR R+TL +LF  E
Sbjct: 127 VRGRSTLFSLFNQE 140


>ref|NP_181342.1| uncharacterized protein [Arabidopsis thaliana]
           gi|330254392|gb|AEC09486.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 619

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 61/138 (44%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
 Frame = -3

Query: 655 PHRSSFSCDKHPDEKFSGFCPSCLCERLITLDQXXXXXXXXXXXXXXXXXXXXXXXXSAA 476
           PHR S SCD+HPDE+F+GFCPSCL +RL  LD                         + A
Sbjct: 31  PHRPSTSCDRHPDERFTGFCPSCLFDRLSVLD--------------------ITGKNNNA 70

Query: 475 IKSLFSKNKESSNVINSSVLPPKPLKNVSFLHELRRSKSFSASKNDVVGLN-LEPQRRSC 299
           + S   K   SS  + +   P     + SF  ELRR+KSFSASK +   L   EPQRRSC
Sbjct: 71  VASSSKKPPSSSAALKAIFKPSS--SSGSFFPELRRTKSFSASKAEAFSLGAFEPQRRSC 128

Query: 298 DVRVRNTLSTLFTLENGH 245
           DVRVRNTL +LF  +  H
Sbjct: 129 DVRVRNTLWSLFHEDAEH 146


Top