BLASTX nr result

ID: Lithospermum22_contig00031191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031191
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   145   3e-33
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]        137   1e-30
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
emb|CBI31781.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   125   4e-27

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/115 (64%), Positives = 96/115 (83%)
 Frame = -1

Query: 345 AGPASHVRVERTSRACFYNGGALAQITSVYQNIXXXXXXEVHQEEDGLLMDRGSSHLAIQ 166
           AGPAS+VRVERTSR CF +GGALA++ S+Y+N+      + HQ ++  +M++ +  LAI+
Sbjct: 325 AGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRAD-HQVDNTEVMEQENHCLAIE 383

Query: 165 GIMAMPDMAVEALALIIRHLKQFGLEKMLCLGASFRPLSGNMEITLSANALQQLE 1
           GIM+MPD+AV+ALAL IRHLKQFGLE++LC+GASFRP S NME+TLSANALQQLE
Sbjct: 384 GIMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSSNMEMTLSANALQQLE 438


>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 846

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/115 (60%), Positives = 88/115 (76%)
 Frame = -1

Query: 345 AGPASHVRVERTSRACFYNGGALAQITSVYQNIXXXXXXEVHQEEDGLLMDRGSSHLAIQ 166
           AGPAS+VRVE  S   F +GGAL+++ S+Y+ +       VH+ E+  +     +  AIQ
Sbjct: 60  AGPASNVRVEDVSSDRFSDGGALSEVMSLYEGVRENYLLNVHEREEAEVKMHEQNQSAIQ 119

Query: 165 GIMAMPDMAVEALALIIRHLKQFGLEKMLCLGASFRPLSGNMEITLSANALQQLE 1
           GI+AMPD+AV+ALALIIRHLKQFG+E++LCLGASFRP S NME+TLSANALQQLE
Sbjct: 120 GILAMPDLAVQALALIIRHLKQFGMERVLCLGASFRPFSSNMEMTLSANALQQLE 174


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
           predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/115 (58%), Positives = 90/115 (78%)
 Frame = -1

Query: 345 AGPASHVRVERTSRACFYNGGALAQITSVYQNIXXXXXXEVHQEEDGLLMDRGSSHLAIQ 166
           +GP+S+VRVER SR CF +GGALA + S+Y+N+      + ++++     ++GS HLAI+
Sbjct: 300 SGPSSNVRVERVSRDCFSDGGALADVMSLYENMIEDNLGD-NEKQMTDAKEQGSCHLAIE 358

Query: 165 GIMAMPDMAVEALALIIRHLKQFGLEKMLCLGASFRPLSGNMEITLSANALQQLE 1
           G++ MPD+AVEALAL +RHLKQFG ++MLCLGASFRP S NME+ LSAN LQQLE
Sbjct: 359 GVIKMPDLAVEALALTVRHLKQFGFDRMLCLGASFRPFSSNMEMNLSANTLQQLE 413


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  134 bits (336), Expect = 1e-29
 Identities = 74/135 (54%), Positives = 96/135 (71%), Gaps = 20/135 (14%)
 Frame = -1

Query: 345 AGPASHVRVERTSRACFYNGGALAQITSVYQNIXXXXXXEVHQEEDGLLMDRGSSHLAIQ 166
           AGPAS+VRVERTSR CF +GGALA++ S+Y+N+      + HQ ++  +M++ +  LAI+
Sbjct: 193 AGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRAD-HQVDNTEVMEQENHCLAIE 251

Query: 165 --------------------GIMAMPDMAVEALALIIRHLKQFGLEKMLCLGASFRPLSG 46
                               GIM+MPD+AV+ALAL IRHLKQFGLE++LC+GASFRP S 
Sbjct: 252 PPTTSYVKFVSVHYGSGIALGIMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSS 311

Query: 45  NMEITLSANALQQLE 1
           NME+TLSANALQQLE
Sbjct: 312 NMEMTLSANALQQLE 326


>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  125 bits (314), Expect = 4e-27
 Identities = 66/115 (57%), Positives = 84/115 (73%)
 Frame = -1

Query: 345 AGPASHVRVERTSRACFYNGGALAQITSVYQNIXXXXXXEVHQEEDGLLMDRGSSHLAIQ 166
           AGPAS+VRVER SR CF +GGALA++ ++Y+N+      +  Q  D  L +  S  L I+
Sbjct: 300 AGPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSIQSND--LTENRSQKLIIK 357

Query: 165 GIMAMPDMAVEALALIIRHLKQFGLEKMLCLGASFRPLSGNMEITLSANALQQLE 1
            +M MPD+AV+ALAL IRHLK+FG E++LC GAS RP S N E+TLSANALQQLE
Sbjct: 358 EVMNMPDLAVQALALTIRHLKEFGFERILCSGASIRPFSSNTEMTLSANALQQLE 412


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