BLASTX nr result

ID: Lithospermum22_contig00031168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031168
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632756.1| PREDICTED: DNA replication complex GINS prot...   216   7e-54
ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|1956306...   207   3e-51
ref|XP_004135842.1| PREDICTED: probable DNA replication complex ...   202   8e-50
ref|XP_003576019.1| PREDICTED: DNA replication complex GINS prot...   202   1e-49
tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea m...   201   3e-49

>ref|XP_003632756.1| PREDICTED: DNA replication complex GINS protein PSF1-like [Vitis
           vinifera] gi|297743415|emb|CBI36282.3| unnamed protein
           product [Vitis vinifera]
          Length = 197

 Score =  216 bits (550), Expect = 7e-54
 Identities = 113/214 (52%), Positives = 149/214 (69%)
 Frame = -3

Query: 974 MYARKGAELVKEVASSEPGQLMAFNNDLFSQVIKECTGLGTRAMILLSXXXXXXXXXENQ 795
           MY R+  +L+KE +S+E GQL  FN+D+F QV+KEC+   T  + L S           +
Sbjct: 1   MYGRRACQLIKEFSSAEKGQLTGFNSDMFDQVVKECS---THYLELQSLM---------R 48

Query: 794 RARGEGDDNDSHPEGSSYQGPHGVGFLIHHASVVRNKRCLMAYVYNRAEVIRYLGWTVER 615
           + + EG D  +      +      G +IHH S++RNKRCLMAYVYNRAE+IR L W +  
Sbjct: 49  KIQEEGMDIQTTRNADHF------GMVIHHLSLMRNKRCLMAYVYNRAEIIRNLRWKIGP 102

Query: 614 VLPGDIEERLSSTEKEYFKNHSKTLQKYMSDLDIDLAVDKVPPKDPYIKVRVLEDIGSVV 435
           VLP +I E+LS +E+EYFKNHS  L+ YMS+L++DL VD VPPKDPYI+VRVL+DIG V+
Sbjct: 103 VLPQEIHEKLSYSEEEYFKNHSTALESYMSELELDLTVDMVPPKDPYIQVRVLDDIGEVL 162

Query: 434 LGDQLANLAHHAILFLRRTDAEHYISQGLMEELS 333
           L DQ ANLA H++ FL+R DAE +ISQGLMEEL+
Sbjct: 163 LSDQSANLACHSMHFLKRIDAEQFISQGLMEELT 196


>ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|195630675|gb|ACG36644.1| DNA
           replication complex GINS protein PSF1 [Zea mays]
           gi|223942169|gb|ACN25168.1| unknown [Zea mays]
           gi|414584737|tpg|DAA35308.1| TPA: DNA replication
           complex GINS protein PSF1 [Zea mays]
          Length = 197

 Score =  207 bits (528), Expect = 3e-51
 Identities = 109/212 (51%), Positives = 141/212 (66%)
 Frame = -3

Query: 974 MYARKGAELVKEVASSEPGQLMAFNNDLFSQVIKECTGLGTRAMILLSXXXXXXXXXENQ 795
           MY R+ ++L+KE+ SSE GQL+ FN+D+F QVI+EC    ++   L+            Q
Sbjct: 1   MYGRRASQLLKEIDSSEAGQLVPFNSDVFDQVIRECNEHNSQFQSLIRKMV-------EQ 53

Query: 794 RARGEGDDNDSHPEGSSYQGPHGVGFLIHHASVVRNKRCLMAYVYNRAEVIRYLGWTVER 615
               E   N+ H            G  IHH S++RNKRCLMAY+YNRAEVI+   W +  
Sbjct: 54  NLDIETTRNEDH-----------YGAAIHHLSLLRNKRCLMAYMYNRAEVIQSFRWKIGP 102

Query: 614 VLPGDIEERLSSTEKEYFKNHSKTLQKYMSDLDIDLAVDKVPPKDPYIKVRVLEDIGSVV 435
           VLP DI+E+L  +EKEYFKNHS  ++ Y+S++DIDL VD VPPKDPYI+VRVLEDIG V 
Sbjct: 103 VLPHDIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVS 162

Query: 434 LGDQLANLAHHAILFLRRTDAEHYISQGLMEE 339
           LGD   +L  +++ FLRRTDAE +ISQGLMEE
Sbjct: 163 LGDHSVSLTKNSLHFLRRTDAEQFISQGLMEE 194


>ref|XP_004135842.1| PREDICTED: probable DNA replication complex GINS protein PSF1-like
           [Cucumis sativus] gi|449491012|ref|XP_004158773.1|
           PREDICTED: probable DNA replication complex GINS protein
           PSF1-like [Cucumis sativus]
          Length = 200

 Score =  202 bits (515), Expect = 8e-50
 Identities = 113/218 (51%), Positives = 146/218 (66%), Gaps = 3/218 (1%)
 Frame = -3

Query: 974 MYARKGAELVKEVASSEPGQLMAFNNDLFSQVIKECTGLGTRAMILLSXXXXXXXXXENQ 795
           MY RK  +LVKE+AS E GQL  FN+DLF QVI EC         L+            +
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLI------------R 48

Query: 794 RARGEGDDNDSHPEGSSYQGPHGVGFLIHHASVVRNKRCLMAYVYNRAEVIRYLGW-TVE 618
           + + EG D  +      +      G LIHH ++VRNKRCLMAYV+NRAE+IR L W  V 
Sbjct: 49  KVQEEGLDLQTTKNEDHF------GALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVG 102

Query: 617 RVLPGDIEERLSSTEKEYFKNHSKTLQKYMSDLDIDLAVDKVPPKDPYIKVRVLEDIGS- 441
            ++P +I+E+LS++E+EYFK HS  L++YMS L++DL VD VPPKDPYI+VRVL+DIG  
Sbjct: 103 SMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEG 162

Query: 440 -VVLGDQLANLAHHAILFLRRTDAEHYISQGLMEELSG 330
            V+  D+ AN A H+I FL+RTDAE YIS+GLMEEL+G
Sbjct: 163 IVLSDDKTANFALHSIHFLKRTDAEQYISRGLMEELTG 200


>ref|XP_003576019.1| PREDICTED: DNA replication complex GINS protein PSF1-like
           [Brachypodium distachyon]
          Length = 197

 Score =  202 bits (514), Expect = 1e-49
 Identities = 105/212 (49%), Positives = 140/212 (66%)
 Frame = -3

Query: 974 MYARKGAELVKEVASSEPGQLMAFNNDLFSQVIKECTGLGTRAMILLSXXXXXXXXXENQ 795
           MY R+ ++L+KE+ S EPGQL+ FN+D+F QV++EC     +   L+           +Q
Sbjct: 1   MYGRRASQLLKELDSCEPGQLVVFNSDVFDQVVRECNEHNAQFQSLIRKMV-------DQ 53

Query: 794 RARGEGDDNDSHPEGSSYQGPHGVGFLIHHASVVRNKRCLMAYVYNRAEVIRYLGWTVER 615
               E   N+ H            G  IHH S++RNKRCL+AY+YNRAE I+   W +  
Sbjct: 54  NLDIETTRNEDH-----------YGAAIHHLSLLRNKRCLIAYMYNRAETIQSFRWKLGP 102

Query: 614 VLPGDIEERLSSTEKEYFKNHSKTLQKYMSDLDIDLAVDKVPPKDPYIKVRVLEDIGSVV 435
           VLP +I+E+L  +EKEYFKNHS  ++ Y+S++DIDL VD VPPKDPYI+VRVLEDIG V 
Sbjct: 103 VLPHEIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVLEDIGEVS 162

Query: 434 LGDQLANLAHHAILFLRRTDAEHYISQGLMEE 339
           LGD   +L  +++ FLRRTDAE +ISQGLMEE
Sbjct: 163 LGDHSISLTKNSLHFLRRTDAEQFISQGLMEE 194


>tpg|DAA35307.1| TPA: hypothetical protein ZEAMMB73_261634 [Zea mays]
          Length = 204

 Score =  201 bits (510), Expect = 3e-49
 Identities = 109/219 (49%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
 Frame = -3

Query: 974 MYARKGAELVKEVASSEPGQLMAFNNDLFSQVIKECTGLGTRAMILLSXXXXXXXXXENQ 795
           MY R+ ++L+KE+ SSE GQL+ FN+D+F QVI+EC    ++   L+            Q
Sbjct: 1   MYGRRASQLLKEIDSSEAGQLVPFNSDVFDQVIRECNEHNSQFQSLIRKMV-------EQ 53

Query: 794 RARGEGDDNDSHPEGSSYQGPHGVGFLIHHASVVRNKRCLMAYVY-------NRAEVIRY 636
               E   N+ H            G  IHH S++RNKRCLMAY+Y       NRAEVI+ 
Sbjct: 54  NLDIETTRNEDH-----------YGAAIHHLSLLRNKRCLMAYMYKTKSSQYNRAEVIQS 102

Query: 635 LGWTVERVLPGDIEERLSSTEKEYFKNHSKTLQKYMSDLDIDLAVDKVPPKDPYIKVRVL 456
             W +  VLP DI+E+L  +EKEYFKNHS  ++ Y+S++DIDL VD VPPKDPYI+VRVL
Sbjct: 103 FRWKIGPVLPHDIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPKDPYIQVRVL 162

Query: 455 EDIGSVVLGDQLANLAHHAILFLRRTDAEHYISQGLMEE 339
           EDIG V LGD   +L  +++ FLRRTDAE +ISQGLMEE
Sbjct: 163 EDIGEVSLGDHSVSLTKNSLHFLRRTDAEQFISQGLMEE 201


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