BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031120
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containi...   304   1e-80
ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   304   1e-80
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   304   1e-80
ref|XP_003608051.1| Pentatricopeptide repeat-containing protein ...   279   6e-73
ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containi...   261   1e-67

>ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 728

 Score =  304 bits (779), Expect = 1e-80
 Identities = 150/268 (55%), Positives = 190/268 (70%), Gaps = 1/268 (0%)
 Frame = -2

Query: 812  CLGCIRQGQILHSDLIKRAFESNVYVGTALVDMYSKCGSIADAQRSFAYISHSNVITWTA 633
            CL   RQGQ+LH+ LIK  F+ NVYVGTALVD YSKCG +A+AQRSF  I   NV  WTA
Sbjct: 449  CLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTA 508

Query: 632  LINGYGHHGMAYDAIILFKHMLEHQISPNAATFLALLSACNHAGLVNEGMRIFNLMKNLY 453
            LINGY +HG+  +AI+LF+ ML   I PNAATF+ +LSACNHAGLV EG+RIF+ M+  Y
Sbjct: 509  LINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCY 568

Query: 452  GIPPDLRHYTCMVDLLAGSGHLEEAEELINNTPFVKDEILLIALLNACWFWMDVEAGKRV 273
            G+ P + HYTC+VDLL  SGHL+EAEE I   P   D I+  ALLNA WFW D+E G+R 
Sbjct: 569  GVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEADGIIWGALLNASWFWKDMEVGERA 628

Query: 272  AEKIFSIYPNHPSACVIMSNMYAGVGKWGKNTK-ASSVVGEQKQKNPGFSWIELKTKVHA 96
            AEK+FS+ PN   A V++SNMYA +G+WG+ TK    +   + +K+PG SWIEL  K+H 
Sbjct: 629  AEKLFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKRLQSLELRKDPGCSWIELNNKIHL 688

Query: 95   FTVDSNSHPYVDVIRSTCKHLNEI*NLI 12
            F+V+  +H Y DVI +T +H+    N I
Sbjct: 689  FSVEDKTHLYSDVIYATVEHITATINSI 716


>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic [Vitis vinifera]
            gi|302143682|emb|CBI22543.3| unnamed protein product
            [Vitis vinifera]
          Length = 728

 Score =  304 bits (779), Expect = 1e-80
 Identities = 142/261 (54%), Positives = 189/261 (72%), Gaps = 1/261 (0%)
 Frame = -2

Query: 812  CLGCIRQGQILHSDLIKRAFESNVYVGTALVDMYSKCGSIADAQRSFAYISHSNVITWTA 633
            CLG + QGQ+LH+ LIK  FESNVYVGT+L+DMYSKCGSI +AQ SF  I   NV  WTA
Sbjct: 439  CLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTA 498

Query: 632  LINGYGHHGMAYDAIILFKHMLEHQISPNAATFLALLSACNHAGLVNEGMRIFNLMKNLY 453
            LING+ +HG+  +AI LF  M+E  ++PN ATF+ +LSAC+ AGLVNEGM+IF+ M+  Y
Sbjct: 499  LINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCY 558

Query: 452  GIPPDLRHYTCMVDLLAGSGHLEEAEELINNTPFVKDEILLIALLNACWFWMDVEAGKRV 273
             + P L HY C+VDLL  SGH+ EAEE I   P   D ++  ALL+ACWFWMD+E G+RV
Sbjct: 559  SVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERV 618

Query: 272  AEKIFSIYPNHPSACVIMSNMYAGVGKWGKNTKASSVV-GEQKQKNPGFSWIELKTKVHA 96
            AEK+FS  P   S+ VI+SN+YAG+G+W +      ++ G + +K+PG SWIEL  K+H 
Sbjct: 619  AEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHV 678

Query: 95   FTVDSNSHPYVDVIRSTCKHL 33
            F+++  SHPY ++I +T +HL
Sbjct: 679  FSIEDRSHPYCNMIYATLEHL 699



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 33/148 (22%)
 Frame = -2

Query: 809 LGCIRQGQILHSDLIKRAFESNVYVGTALVDMYSKCGSIADAQRSFAYISHSN------- 651
           L C+R G+++H  ++K   ES   VG+AL+  Y+ C  I +A+R F  +   N       
Sbjct: 111 LRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLM 170

Query: 650 ------------------------VITWTALINGYGHHGMAY-DAIILFKHMLEH-QISP 549
                                   V+ WT LI+G+  +G     A+ +F+ M+   + +P
Sbjct: 171 LVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTP 230

Query: 548 NAATFLALLSACNHAGLVNEGMRIFNLM 465
           N  TF  ++ AC   G+++ G  +  L+
Sbjct: 231 NEFTFDCVVRACGRLGILSVGRTVHGLL 258


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  304 bits (779), Expect = 1e-80
 Identities = 142/261 (54%), Positives = 190/261 (72%), Gaps = 1/261 (0%)
 Frame = -2

Query: 812  CLGCIRQGQILHSDLIKRAFESNVYVGTALVDMYSKCGSIADAQRSFAYISHSNVITWTA 633
            CLG ++QGQ+LH+ LIK  FESNVYVGT+L+DMYSKCGSI +AQ SF  I   NV  WTA
Sbjct: 479  CLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTA 538

Query: 632  LINGYGHHGMAYDAIILFKHMLEHQISPNAATFLALLSACNHAGLVNEGMRIFNLMKNLY 453
            LING+ +HG+  +AI LF  M+E  ++PN ATF+ +LSAC+ AGLVNEGM+IF+ M+  Y
Sbjct: 539  LINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCY 598

Query: 452  GIPPDLRHYTCMVDLLAGSGHLEEAEELINNTPFVKDEILLIALLNACWFWMDVEAGKRV 273
             + P L HY C+VDLL  SGH+ EAEE I   P   D ++  ALL+ACWFWMD+E G+RV
Sbjct: 599  SVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERV 658

Query: 272  AEKIFSIYPNHPSACVIMSNMYAGVGKWGKNTKASSVV-GEQKQKNPGFSWIELKTKVHA 96
            AEK+FS  P   S+ VI+SN+YAG+G+W +      ++ G + +K+PG SWIEL  K+H 
Sbjct: 659  AEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWIELNNKIHV 718

Query: 95   FTVDSNSHPYVDVIRSTCKHL 33
            F+++  SHPY ++I +T +HL
Sbjct: 719  FSIEDRSHPYCNMIYATLEHL 739


>ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509106|gb|AES90248.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 763

 Score =  279 bits (713), Expect = 6e-73
 Identities = 140/263 (53%), Positives = 180/263 (68%), Gaps = 1/263 (0%)
 Frame = -2

Query: 797  RQGQILHSDLIKRAFESNVYVGTALVDMYSKCGSIADAQRSFAYISHSNVITWTALINGY 618
            +QGQ+LH+ L K  ++ NVYVGTALVD YSKCG +ADAQRSF  I   NV  WTALINGY
Sbjct: 450  QQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGY 509

Query: 617  GHHGMAYDAIILFKHMLEHQISPNAATFLALLSACNHAGLVNEGMRIFNLMKNLYGIPPD 438
             +HG   +AI  F+ ML+  + PNAATF+A+LSAC+HAGLV+EG++ F+ M+  Y I P 
Sbjct: 510  AYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPT 569

Query: 437  LRHYTCMVDLLAGSGHLEEAEELINNTPFVKDEILLIALLNACWFWMDVEAGKRVAEKIF 258
            + HYTC+VDLL  SG ++EAEE I   P   D ++  ALLNA  FW +VE G+R A K+F
Sbjct: 570  IEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLF 629

Query: 257  SIYPNHPSACVIMSNMYAGVGKWGKNTK-ASSVVGEQKQKNPGFSWIELKTKVHAFTVDS 81
            S+ PN  SA V +SNMYA  G+WGK TK    +   + +K+ GFSWIEL   VH F+V+ 
Sbjct: 630  SLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVED 689

Query: 80   NSHPYVDVIRSTCKHLNEI*NLI 12
             +HPY DVI  T +H+    N I
Sbjct: 690  TTHPYSDVIYKTVEHITATINSI 712


>ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  261 bits (667), Expect = 1e-67
 Identities = 130/261 (49%), Positives = 172/261 (65%), Gaps = 1/261 (0%)
 Frame = -2

Query: 812  CLGCIRQGQILHSDLIKRAFESNVYVGTALVDMYSKCGSIADAQRSFAYISHSNVITWTA 633
            CL  I+ GQ LH   I+ AF+SNVYVGT+L+DMY+KCGSI DAQ SFA +   NV  +TA
Sbjct: 444  CLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFPNVAAFTA 503

Query: 632  LINGYGHHGMAYDAIILFKHMLEHQISPNAATFLALLSACNHAGLVNEGMRIFNLMKNLY 453
            LINGY HHG+  +A  +F  ML+H++ PN AT L +LSAC+ AG+V EGM +F+ M+  Y
Sbjct: 504  LINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCY 563

Query: 452  GIPPDLRHYTCMVDLLAGSGHLEEAEELINNTPFVKDEILLIALLNACWFWMDVEAGKRV 273
            G+ P L HY C+VDLL  SG L EAE  I   P   D ++  ALLNACWFWMD+E G+ V
Sbjct: 564  GVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMDLELGESV 623

Query: 272  AEKIFSIYPNHPSACVIMSNMYAGVGKW-GKNTKASSVVGEQKQKNPGFSWIELKTKVHA 96
            A+K+ S+ P   SA +I+SN+YA +GKW  K      ++  + +K  G SWI++  K   
Sbjct: 624  AKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLKVKKIRGCSWIDVNNKTCV 683

Query: 95   FTVDSNSHPYVDVIRSTCKHL 33
            F+    SHP  + I ST +HL
Sbjct: 684  FSAGDRSHPNCNAIYSTLEHL 704