BLASTX nr result

ID: Lithospermum22_contig00031105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031105
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    65   1e-08
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    64   4e-08
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    64   4e-08
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...    63   6e-08
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    63   6e-08

>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
           gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
           protein [Arabidopsis thaliana]
           gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
           [Arabidopsis thaliana]
          Length = 343

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = +1

Query: 1   IWKLKIPGKIKHFIWRGSNQILATSNNLIRRKIHINPMCCLCHMETETTMHLFNRCTFAK 180
           IWKLK   KIKHF+W+  +  LAT +NL RR I  +P C  C  E ET+ HLF  C +A+
Sbjct: 18  IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77

Query: 181 EACR 192
           +  R
Sbjct: 78  QVWR 81


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 30/65 (46%), Positives = 37/65 (56%)
 Frame = +1

Query: 1   IWKLKIPGKIKHFIWRGSNQILATSNNLIRRKIHINPMCCLCHMETETTMHLFNRCTFAK 180
           IW L I  K+KHF+WR  +Q LAT+  L  R + I+P C  CH E E+  H    C FA 
Sbjct: 162 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFAT 221

Query: 181 EACRL 195
            A RL
Sbjct: 222 MAWRL 226


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 30/65 (46%), Positives = 37/65 (56%)
 Frame = +1

Query: 1    IWKLKIPGKIKHFIWRGSNQILATSNNLIRRKIHINPMCCLCHMETETTMHLFNRCTFAK 180
            IW L I  K+KHF+WR  +Q LAT+  L  R + I+P C  CH E E+  H    C FA 
Sbjct: 1428 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFAT 1487

Query: 181  EACRL 195
             A RL
Sbjct: 1488 MAWRL 1492


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 26/61 (42%), Positives = 40/61 (65%)
 Frame = +1

Query: 1   IWKLKIPGKIKHFIWRGSNQILATSNNLIRRKIHINPMCCLCHMETETTMHLFNRCTFAK 180
           +WK+++PGK+KHFIWR S+ ILA   NL +R + ++  C +C+   E   HLF +C   K
Sbjct: 287 VWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVK 346

Query: 181 E 183
           +
Sbjct: 347 K 347


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 26/61 (42%), Positives = 40/61 (65%)
 Frame = +1

Query: 1    IWKLKIPGKIKHFIWRGSNQILATSNNLIRRKIHINPMCCLCHMETETTMHLFNRCTFAK 180
            +WK+++PGK+KHFIWR S+ ILA   NL +R + ++  C +C+   E   HLF +C   K
Sbjct: 1180 VWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMNEDAGHLFFKCKKVK 1239

Query: 181  E 183
            +
Sbjct: 1240 K 1240


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