BLASTX nr result

ID: Lithospermum22_contig00031103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031103
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   170   3e-40
emb|CBI40324.3| unnamed protein product [Vitis vinifera]              167   2e-39
ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   162   6e-38
ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putativ...   162   1e-37
ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicag...   159   5e-37

>ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
           gi|147785187|emb|CAN75439.1| hypothetical protein
           VITISV_000835 [Vitis vinifera]
          Length = 491

 Score =  170 bits (431), Expect = 3e-40
 Identities = 94/165 (56%), Positives = 106/165 (64%)
 Frame = +2

Query: 272 MNSRTRYPPPGIMPGGSRGLVTQNNQSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXMQSY 451
           M++R RYPP GI  GG  G +   N SG +                           Q+ 
Sbjct: 1   MHARGRYPP-GIHGGGRGGGMGTGNPSGPNPNFQYRNPNQQQYVQRNVGQSYQQFQQQNQ 59

Query: 452 NKEXXXXXXXXXXXXXWLRRNQFPSDNVVEEVEKTVQSEALDSSSQDWKANLKVPPPDTR 631
            +              WLRRNQ  +D+ V+EVEKTVQSEA+DSSSQDWKA LK+PPPDTR
Sbjct: 60  QQ--------------WLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTR 105

Query: 632 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPI 766
           YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFE+PSPIQEESIPI
Sbjct: 106 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPI 150


>emb|CBI40324.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  167 bits (423), Expect = 2e-39
 Identities = 79/89 (88%), Positives = 85/89 (95%)
 Frame = +2

Query: 500 WLRRNQFPSDNVVEEVEKTVQSEALDSSSQDWKANLKVPPPDTRYRTEDVTATKGNEFED 679
           WLRRNQ  +D+ V+EVEKTVQSEA+DSSSQDWKA LK+PPPDTRYRTEDVTATKGNEFED
Sbjct: 43  WLRRNQAGADSAVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFED 102

Query: 680 YFLKRELLMGIYEKGFEKPSPIQEESIPI 766
           YFLKRELLMGIYEKGFE+PSPIQEESIPI
Sbjct: 103 YFLKRELLMGIYEKGFERPSPIQEESIPI 131


>ref|XP_004133869.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
           sativus] gi|449480172|ref|XP_004155819.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 8-like [Cucumis
           sativus]
          Length = 492

 Score =  162 bits (411), Expect = 6e-38
 Identities = 78/92 (84%), Positives = 86/92 (93%), Gaps = 3/92 (3%)
 Frame = +2

Query: 500 WLRRNQF---PSDNVVEEVEKTVQSEALDSSSQDWKANLKVPPPDTRYRTEDVTATKGNE 670
           WL+RNQ    P+D+ V+EVEKTVQSEA+DSSSQDWKA LK+PPPDTRY+TEDVTATKGNE
Sbjct: 60  WLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNE 119

Query: 671 FEDYFLKRELLMGIYEKGFEKPSPIQEESIPI 766
           FEDYFLKRELLMGIYEKGFE+PSPIQEESIPI
Sbjct: 120 FEDYFLKRELLMGIYEKGFERPSPIQEESIPI 151


>ref|XP_002511831.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549011|gb|EEF50500.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 507

 Score =  162 bits (409), Expect = 1e-37
 Identities = 77/90 (85%), Positives = 86/90 (95%), Gaps = 1/90 (1%)
 Frame = +2

Query: 500 WLRRNQFP-SDNVVEEVEKTVQSEALDSSSQDWKANLKVPPPDTRYRTEDVTATKGNEFE 676
           WLRR+Q P +D+ V+EVEKTVQSEA+DS+SQDWKA LK+PPPDTRY+TEDVTATKGNEFE
Sbjct: 77  WLRRSQLPPADSSVDEVEKTVQSEAVDSTSQDWKARLKIPPPDTRYKTEDVTATKGNEFE 136

Query: 677 DYFLKRELLMGIYEKGFEKPSPIQEESIPI 766
           DYFLKRELLMGIYEKGFE+PSPIQEESIPI
Sbjct: 137 DYFLKRELLMGIYEKGFERPSPIQEESIPI 166


>ref|XP_003623900.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355498915|gb|AES80118.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 514

 Score =  159 bits (403), Expect = 5e-37
 Identities = 95/171 (55%), Positives = 105/171 (61%), Gaps = 7/171 (4%)
 Frame = +2

Query: 275 NSRTRYPPP-GIMPGGSRGL---VTQNNQSGGSXXXXXXXXXXXXXXXXXXXXXXXXXXM 442
           N+R RYPP  G+  GGS G    +T N+ +G                             
Sbjct: 4   NNRGRYPPGIGLGRGGSGGGGGGLTSNSNTGFQQRPHHQYQQQQQYVQRHMMQNQHQQHY 63

Query: 443 QSYNKEXXXXXXXXXXXXXWLRRNQF---PSDNVVEEVEKTVQSEALDSSSQDWKANLKV 613
           Q+  ++             WLRRNQ       NVVEEVEKTVQSEA DSSSQDWKA LK+
Sbjct: 64  QN-QQQNQQQNQQQQQQQQWLRRNQLGGGTDTNVVEEVEKTVQSEANDSSSQDWKARLKL 122

Query: 614 PPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFEKPSPIQEESIPI 766
           PP DTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFE+PSPIQEESIPI
Sbjct: 123 PPADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPI 173


Top