BLASTX nr result

ID: Lithospermum22_contig00031063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031063
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09
ref|XP_002520999.1| pentatricopeptide repeat-containing protein,...    60   2e-07
ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat...    60   2e-07
ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07
ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07

>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/60 (53%), Positives = 39/60 (65%)
 Frame = +2

Query: 131 EKFLKINCKYGTIKINDALNHFQQMLHMLPAPETSSFNLLLGGVAKIKNYEQVVFLYNKM 310
           E FLK NCK G IK ++A + F  ++ M P P  SSFN LLG VAKIK Y  V+ LY +M
Sbjct: 59  ENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRM 118


>ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539836|gb|EEF41416.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +2

Query: 131 EKFLKINCKYGTIKINDALNHFQQMLHMLPAPETSSFNLLLGGVAKIKNYEQVVFLYNKM 310
           E+FL+INCK G   +++AL+ F QM+HM   P  S FN L G +AK K Y  V+ +  +M
Sbjct: 74  EQFLEINCKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRM 133

Query: 311 VAASLL 328
            +  LL
Sbjct: 134 NSIGLL 139


>ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/59 (50%), Positives = 36/59 (61%)
 Frame = +2

Query: 149 NCKYGTIKINDALNHFQQMLHMLPAPETSSFNLLLGGVAKIKNYEQVVFLYNKMVAASL 325
           NCK G I +  A + F  M+   P P  SSFN LLGG+AKI +Y Q+  LYNKM  A L
Sbjct: 63  NCKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGL 121


>ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/63 (46%), Positives = 37/63 (58%)
 Frame = +2

Query: 137 FLKINCKYGTIKINDALNHFQQMLHMLPAPETSSFNLLLGGVAKIKNYEQVVFLYNKMVA 316
           F   +CK G +    AL+ F  M+   P P  SSFN LL G+AKIK+Y QV  LYN+M  
Sbjct: 38  FFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRL 97

Query: 317 ASL 325
           + L
Sbjct: 98  SGL 100


>ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/63 (46%), Positives = 37/63 (58%)
 Frame = +2

Query: 137 FLKINCKYGTIKINDALNHFQQMLHMLPAPETSSFNLLLGGVAKIKNYEQVVFLYNKMVA 316
           F   +CK G +    AL+ F  M+   P P  SSFN LL G+AKIK+Y QV  LYN+M  
Sbjct: 38  FFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRL 97

Query: 317 ASL 325
           + L
Sbjct: 98  SGL 100


Top