BLASTX nr result

ID: Lithospermum22_contig00031054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00031054
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   222   3e-56
ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   218   3e-55
ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   213   1e-53
emb|CBI24488.3| unnamed protein product [Vitis vinifera]              213   1e-53
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]                 210   8e-53

>ref|XP_003556075.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 693

 Score =  222 bits (565), Expect = 3e-56
 Identities = 114/157 (72%), Positives = 124/157 (78%)
 Frame = -3

Query: 472 TLLFSATLPDWVKQISRRFLKQDKKTADLVGNXXXXXXXXXXHIVMPCSREARPQLIPDI 293
           TLLFSATLPDWVKQI+ RFLK DKKTADLVGN          HIV+PC+  AR QLIPDI
Sbjct: 301 TLLFSATLPDWVKQIAARFLKPDKKTADLVGNTKMKASINVRHIVLPCTSSARAQLIPDI 360

Query: 292 IRCYSSGGQTIIFTETKDSXXXXXXXXXXXXXXXGDIQQATREVTLKGFRSGKFTILVAT 113
           IRCYSSGG+TI+FTETK+S               GDIQQ+TREVTL GFRSGKF  LVAT
Sbjct: 361 IRCYSSGGRTIVFTETKESASQLAGILTGAKALHGDIQQSTREVTLSGFRSGKFMTLVAT 420

Query: 112 NVAARGLDIDNVQLIIQCEPPRDVDAYIHRSGRTGRA 2
           NVAARGLDI++VQLIIQCEPPRDV+AYIHRSGRTGRA
Sbjct: 421 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 457


>ref|XP_003536498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Glycine max]
          Length = 697

 Score =  218 bits (556), Expect = 3e-55
 Identities = 112/157 (71%), Positives = 123/157 (78%)
 Frame = -3

Query: 472 TLLFSATLPDWVKQISRRFLKQDKKTADLVGNXXXXXXXXXXHIVMPCSREARPQLIPDI 293
           TLLFSATLPDWVKQI+ +FLK DKKTADLVGN          HIV+PC+  AR QLIPDI
Sbjct: 306 TLLFSATLPDWVKQIALKFLKPDKKTADLVGNTKMKASTNVRHIVLPCTSSARAQLIPDI 365

Query: 292 IRCYSSGGQTIIFTETKDSXXXXXXXXXXXXXXXGDIQQATREVTLKGFRSGKFTILVAT 113
           IRCYSSGG+TI+FTETK+                GDIQQ+TREVTL GFRSGKF  LVAT
Sbjct: 366 IRCYSSGGRTIVFTETKECASQLAGILNGAKALHGDIQQSTREVTLSGFRSGKFMTLVAT 425

Query: 112 NVAARGLDIDNVQLIIQCEPPRDVDAYIHRSGRTGRA 2
           NVAARGLDI++VQLIIQCEPPRDV+AYIHRSGRTGRA
Sbjct: 426 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 462


>ref|XP_002269873.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Vitis
           vinifera]
          Length = 711

 Score =  213 bits (542), Expect = 1e-53
 Identities = 111/157 (70%), Positives = 120/157 (76%)
 Frame = -3

Query: 472 TLLFSATLPDWVKQISRRFLKQDKKTADLVGNXXXXXXXXXXHIVMPCSREARPQLIPDI 293
           TLLFSATLP WVK+IS RFLK   KTADLVGN          HIV+PCS  AR Q+IPD+
Sbjct: 307 TLLFSATLPGWVKEISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSARSQVIPDV 366

Query: 292 IRCYSSGGQTIIFTETKDSXXXXXXXXXXXXXXXGDIQQATREVTLKGFRSGKFTILVAT 113
           IRCYSSGG+TIIFTETKDS               GDIQQ+ REVTL GFRSGKF  LVAT
Sbjct: 367 IRCYSSGGRTIIFTETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSGKFMTLVAT 426

Query: 112 NVAARGLDIDNVQLIIQCEPPRDVDAYIHRSGRTGRA 2
           NVAARGLDI++VQLIIQCEPPRDV+AYIHRSGRTGRA
Sbjct: 427 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 463


>emb|CBI24488.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  213 bits (542), Expect = 1e-53
 Identities = 111/157 (70%), Positives = 120/157 (76%)
 Frame = -3

Query: 472 TLLFSATLPDWVKQISRRFLKQDKKTADLVGNXXXXXXXXXXHIVMPCSREARPQLIPDI 293
           TLLFSATLP WVK+IS RFLK   KTADLVGN          HIV+PCS  AR Q+IPD+
Sbjct: 160 TLLFSATLPGWVKEISSRFLKPTLKTADLVGNEKMKASTNVRHIVLPCSSSARSQVIPDV 219

Query: 292 IRCYSSGGQTIIFTETKDSXXXXXXXXXXXXXXXGDIQQATREVTLKGFRSGKFTILVAT 113
           IRCYSSGG+TIIFTETKDS               GDIQQ+ REVTL GFRSGKF  LVAT
Sbjct: 220 IRCYSSGGRTIIFTETKDSASELAGLLPGARALHGDIQQSQREVTLSGFRSGKFMTLVAT 279

Query: 112 NVAARGLDIDNVQLIIQCEPPRDVDAYIHRSGRTGRA 2
           NVAARGLDI++VQLIIQCEPPRDV+AYIHRSGRTGRA
Sbjct: 280 NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRA 316


>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
          Length = 713

 Score =  210 bits (535), Expect = 8e-53
 Identities = 111/157 (70%), Positives = 121/157 (77%)
 Frame = -3

Query: 472 TLLFSATLPDWVKQISRRFLKQDKKTADLVGNXXXXXXXXXXHIVMPCSREARPQLIPDI 293
           TLLFSATLPDWVK I+ +FLK DKKTADLVGN          HIV+PCS  AR QLIPDI
Sbjct: 317 TLLFSATLPDWVKHIAAQFLKPDKKTADLVGNTKMKASTNVRHIVLPCSAPARSQLIPDI 376

Query: 292 IRCYSSGGQTIIFTETKDSXXXXXXXXXXXXXXXGDIQQATREVTLKGFRSGKFTILVAT 113
           IRCYSSGG+TIIFTETK+S               GDIQQA REVTL GFRSGKF  LVAT
Sbjct: 377 IRCYSSGGRTIIFTETKESASQLAGLLPGARALHGDIQQAQREVTLFGFRSGKFMTLVAT 436

Query: 112 NVAARGLDIDNVQLIIQCEPPRDVDAYIHRSGRTGRA 2
           NVAARGLDI++VQLIIQCE PR+V++YIHRSGRTGRA
Sbjct: 437 NVAARGLDINDVQLIIQCEFPREVESYIHRSGRTGRA 473


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