BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030901
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   280   2e-73
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   272   4e-71
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-70
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              270   1e-70
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-70

>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  280 bits (715), Expect = 2e-73
 Identities = 132/197 (67%), Positives = 166/197 (84%)
 Frame = -3

Query: 599 MPERSLLSMTTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEALGLL 420
           MPE+SL+S+T M+T YAK G +DEAR+LFD + ERD +CWNVMIDGYAQHG   E L L 
Sbjct: 1   MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLF 60

Query: 419 REMLLANNVRPNEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLVGSALIDMYSK 240
           R+ML A  VRPNEVTV+A LSA GQ G LE+G W+H+Y+++NG+ +NV VG++LIDMYSK
Sbjct: 61  RQMLNAK-VRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSK 119

Query: 239 CGSLEDARLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRIRPTDITFIGV 60
           CGSLEDARLVF+ + +KDVV WNSM+VGYA+HGFS++AL+LF EM +   +PTDITFIGV
Sbjct: 120 CGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGV 179

Query: 59  LNACAHAGLVSDGWRYF 9
           LNAC+HAGLVS+GW++F
Sbjct: 180 LNACSHAGLVSEGWKFF 196



 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 58/182 (31%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
 Frame = -3

Query: 572 TTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEALGLLREMLLANNV 393
           T+++  Y+K G +++ARL+F+R+  +DVV WN M+ GYA HG S++AL L +EM +    
Sbjct: 111 TSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIG-Y 169

Query: 392 RPNEVTVVAALSAVGQAGELESGHWIHAYVKSN--GLEVNVLVGSALIDMYSKCGSLEDA 219
           +P ++T +  L+A   AG +  G W   Y   +  G+E  V     ++++  + G LE+A
Sbjct: 170 QPTDITFIGVLNACSHAGLVSEG-WKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEA 228

Query: 218 -RLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRIRPTDITFIGVLNACAH 42
             LV +  ID+D VLW +++    LHG      ++ + ++ + +  +  T++ + N  A 
Sbjct: 229 YELVKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSG-TYVLLSNIYAA 287

Query: 41  AG 36
           AG
Sbjct: 288 AG 289


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  272 bits (695), Expect = 4e-71
 Identities = 133/203 (65%), Positives = 165/203 (81%)
 Frame = -3

Query: 611 VFDRMPERSLLSMTTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEA 432
           +FD+MPERSL+S+TTM+T Y+K G++D+AR LF+ M ERDVVCWNVMI GYAQ G   E+
Sbjct: 198 LFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNES 257

Query: 431 LGLLREMLLANNVRPNEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLVGSALID 252
           L L R ML+A  + PNEVTV+A LSA GQ G LESG WIH+Y+++ G+++NV VG+ALID
Sbjct: 258 LKLFRRMLVAKAI-PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALID 316

Query: 251 MYSKCGSLEDARLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRIRPTDIT 72
           MYSKCGSLEDARLVFD + DKDVV WNSMIVGYA+HGFS+ AL+LF+EM     +PTDIT
Sbjct: 317 MYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDIT 376

Query: 71  FIGVLNACAHAGLVSDGWRYFDL 3
           FIG+L+AC H GLV +G  +F L
Sbjct: 377 FIGILSACGHGGLVEEGRSFFRL 399



 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 64/213 (30%), Positives = 98/213 (46%), Gaps = 31/213 (14%)
 Frame = -3

Query: 566 MMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEALGLLREMLLANNVRP 387
           +   YA  G +D +  +F+   E +V  ++ +I  + Q      A G   +ML    V P
Sbjct: 85  LQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCG-VEP 143

Query: 386 NEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLVGSALIDM-------------- 249
           N  T     S+V ++  LESG  +H      GL  ++ V + L+D+              
Sbjct: 144 NAFT----FSSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLF 199

Query: 248 -----------------YSKCGSLEDARLVFDGMIDKDVVLWNSMIVGYALHGFSREALK 120
                            YSK G L+ AR +F+GM ++DVV WN MI GYA  G   E+LK
Sbjct: 200 DKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLK 259

Query: 119 LFDEMIIKRIRPTDITFIGVLNACAHAGLVSDG 21
           LF  M++ +  P ++T + VL+AC   G +  G
Sbjct: 260 LFRRMLVAKAIPNEVTVLAVLSACGQLGALESG 292


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  270 bits (691), Expect = 1e-70
 Identities = 132/208 (63%), Positives = 160/208 (76%), Gaps = 6/208 (2%)
 Frame = -3

Query: 611 VFDRMPERSLLSMTTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEA 432
           +FD MPERSL+S T M+T YAK+G + EAR+LF+ MG +DVVCWNVMIDGYAQHG   EA
Sbjct: 174 LFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEA 233

Query: 431 LGLLREMLLA------NNVRPNEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLV 270
           L   R+M++         VRPNE+TVVA LS+ GQ G LE G W+H+YV++NG++VNV V
Sbjct: 234 LVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRV 293

Query: 269 GSALIDMYSKCGSLEDARLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRI 90
           G+AL+DMY KCGSLEDAR VFD M  KDVV WNSMI+GY +HGFS EAL+LF EM    +
Sbjct: 294 GTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGV 353

Query: 89  RPTDITFIGVLNACAHAGLVSDGWRYFD 6
           +P+DITF+ VL ACAHAGLVS GW  FD
Sbjct: 354 KPSDITFVAVLTACAHAGLVSKGWEVFD 381



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 54/220 (24%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
 Frame = -3

Query: 566 MMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEALGLLREMLLANNVRP 387
           +   YA  G +  +  LF R    +V  W  +I+ +A       AL    +ML  + ++P
Sbjct: 61  LQRSYASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQML-THPIQP 119

Query: 386 NEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLVGSALIDMYSKCGSLEDARLVF 207
           N  T    LS++ +A  L     +H++    GL  ++ V + L+D Y++ G +  A+ +F
Sbjct: 120 NAFT----LSSLLKACTLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLF 175

Query: 206 DGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIK----------------------- 96
           D M ++ +V + +M+  YA HG   EA  LF+ M +K                       
Sbjct: 176 DAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALV 235

Query: 95  ---------------RIRPTDITFIGVLNACAHAGLVSDG 21
                          ++RP +IT + VL++C   G +  G
Sbjct: 236 FFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECG 275


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  270 bits (691), Expect = 1e-70
 Identities = 129/202 (63%), Positives = 163/202 (80%)
 Frame = -3

Query: 611 VFDRMPERSLLSMTTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEA 432
           +FD MPE+SL+S+T M+T YAK+G++D AR+LFD M ERD VCWNVMIDGY Q+G   EA
Sbjct: 115 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 174

Query: 431 LGLLREMLLANNVRPNEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLVGSALID 252
           L L R ML A   +PNEVTV++ LSA GQ G LESG W+H+Y+++NG++ NV VG+AL+D
Sbjct: 175 LVLFRRMLKAK-AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVD 233

Query: 251 MYSKCGSLEDARLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRIRPTDIT 72
           MYSKCGSLEDARLVFD + DKDVV WNSMIVGYA+HGFS+EAL+LF  M    + PT+IT
Sbjct: 234 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNIT 293

Query: 71  FIGVLNACAHAGLVSDGWRYFD 6
           FIG+L+AC H+G V++GW  F+
Sbjct: 294 FIGILSACGHSGWVTEGWDIFN 315



 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
 Frame = -3

Query: 572 TTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEALGLLREMLLANNV 393
           T ++  Y+K G +++ARL+FD++ ++DVV WN MI GYA HG S+EAL L + M     +
Sbjct: 229 TALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG-L 287

Query: 392 RPNEVTVVAALSAVGQAGELESGHWIHAYVKSN-GLEVNVLVGSALIDMYSKCGSLEDA- 219
            P  +T +  LSA G +G +  G  I   +K   G+E  +     ++++  + G +E A 
Sbjct: 288 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 347

Query: 218 RLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRIRPTDITFIGVLNACAHA 39
            LV +  I+ D VLW +++    LHG      K+  E+++ +      T+I + N  A  
Sbjct: 348 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIV-ELLVDQNLANSGTYILLSNIYAAV 406

Query: 38  G 36
           G
Sbjct: 407 G 407


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  270 bits (691), Expect = 1e-70
 Identities = 129/202 (63%), Positives = 163/202 (80%)
 Frame = -3

Query: 611 VFDRMPERSLLSMTTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEA 432
           +FD MPE+SL+S+T M+T YAK+G++D AR+LFD M ERD VCWNVMIDGY Q+G   EA
Sbjct: 181 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEA 240

Query: 431 LGLLREMLLANNVRPNEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLVGSALID 252
           L L R ML A   +PNEVTV++ LSA GQ G LESG W+H+Y+++NG++ NV VG+AL+D
Sbjct: 241 LVLFRRMLKAK-AKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVD 299

Query: 251 MYSKCGSLEDARLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRIRPTDIT 72
           MYSKCGSLEDARLVFD + DKDVV WNSMIVGYA+HGFS+EAL+LF  M    + PT+IT
Sbjct: 300 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNIT 359

Query: 71  FIGVLNACAHAGLVSDGWRYFD 6
           FIG+L+AC H+G V++GW  F+
Sbjct: 360 FIGILSACGHSGWVTEGWDIFN 381



 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
 Frame = -3

Query: 572 TTMMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEALGLLREMLLANNV 393
           T ++  Y+K G +++ARL+FD++ ++DVV WN MI GYA HG S+EAL L + M     +
Sbjct: 295 TALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG-L 353

Query: 392 RPNEVTVVAALSAVGQAGELESGHWIHAYVKSN-GLEVNVLVGSALIDMYSKCGSLEDA- 219
            P  +T +  LSA G +G +  G  I   +K   G+E  +     ++++  + G +E A 
Sbjct: 354 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 413

Query: 218 RLVFDGMIDKDVVLWNSMIVGYALHGFSREALKLFDEMIIKRIRPTDITFIGVLNACAHA 39
            LV +  I+ D VLW +++    LHG      K+  E+++ +      T+I + N  A  
Sbjct: 414 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIV-ELLVDQNLANSGTYILLSNIYAAV 472

Query: 38  G 36
           G
Sbjct: 473 G 473



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
 Frame = -3

Query: 566 MMTGYAKNGDVDEARLLFDRMGERDVVCWNVMIDGYAQHGRSKEALGLLREMLLANNVRP 387
           +   YA  G +D +  LF R     V  W  +I G+A  G  ++AL    +ML    V P
Sbjct: 68  LQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQML-TQGVEP 126

Query: 386 NEVTVVAALSAVGQAGELESGHWIHAYVKSNGLEVNVLVGSALIDMYSKCGSLEDARLVF 207
           N  T     S++ +   +E G  +H+     G + ++ V + L+D+Y++ G +  A+ +F
Sbjct: 127 NAFT----FSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 182

Query: 206 DGMIDKDVVLWNSMIVGYALH-------------------------------GFSREALK 120
           D M +K +V   +M+  YA H                               G   EAL 
Sbjct: 183 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALV 242

Query: 119 LFDEMIIKRIRPTDITFIGVLNACAHAGLVSDG 21
           LF  M+  + +P ++T + VL+AC   G +  G
Sbjct: 243 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESG 275