BLASTX nr result

ID: Lithospermum22_contig00030867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030867
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300879.1| predicted protein [Populus trichocarpa] gi|2...   252   7e-65
ref|XP_002527105.1| DNA binding protein, putative [Ricinus commu...   249   5e-64
ref|XP_002307550.1| predicted protein [Populus trichocarpa] gi|2...   245   9e-63
gb|AGC22550.1| male sterility related AT-hook DNA binding protei...   244   1e-62
ref|NP_181822.1| AT-hook DNA-binding-like protein [Arabidopsis t...   242   6e-62

>ref|XP_002300879.1| predicted protein [Populus trichocarpa] gi|222842605|gb|EEE80152.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  252 bits (643), Expect = 7e-65
 Identities = 145/226 (64%), Positives = 165/226 (73%), Gaps = 18/226 (7%)
 Frame = -1

Query: 625 MAGGAELTLPSQSTKGSME--------NIHGIDFGGLMVTPK--SAVLPYSS---GET-I 488
           MAG A+LT PS  ++  M+        N H      +++ PK   AV P SS   GET I
Sbjct: 1   MAGAADLTFPSLGSERIMDRSQGSEKVNNHRPSIEAILMAPKLPKAVPPVSSAPDGETMI 60

Query: 487 RRPRGRPAGSKNKPKPPIIITRDSANSLRAQALEINSGRDICESLLNFSRRKQRGISVLS 308
           RRPRGRPAGSKNKPKPPII+TRDSAN+LRA A+E++SG D+CESL NF+RRKQRGISVLS
Sbjct: 61  RRPRGRPAGSKNKPKPPIIVTRDSANALRAHAMEVSSGCDVCESLANFARRKQRGISVLS 120

Query: 307 ATGCVTNVTLRQPASSGSIVTLHGRFEILSLLGSVLPPPAPAGITGLSIFLXXXXXXXXX 128
            +GCVTNVTLRQP SSG+IVTLHGRFEILSLLGSVLPPPAP GITGL+I+L         
Sbjct: 121 GSGCVTNVTLRQPTSSGAIVTLHGRFEILSLLGSVLPPPAPQGITGLTIYLAGAQGQVVG 180

Query: 127 XXXXXALIASGPVVIMAATFMNAAFDRLPLEVDDDE----CENQQY 2
                ALIASGPVVIMAA+FM A FDRLPL  DDDE     +NQ Y
Sbjct: 181 GGVVGALIASGPVVIMAASFMKATFDRLPL--DDDEITAAVQNQHY 224


>ref|XP_002527105.1| DNA binding protein, putative [Ricinus communis]
           gi|223533528|gb|EEF35268.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 279

 Score =  249 bits (636), Expect = 5e-64
 Identities = 136/213 (63%), Positives = 162/213 (76%), Gaps = 13/213 (6%)
 Frame = -1

Query: 625 MAGGAELTLPSQSTKGSMENIHGIDFGG--------LMVTPK--SAVLPYSS---GETIR 485
           MAGGA+L +P   +K  ME+    + G         ++++PK   +V P SS   GETIR
Sbjct: 1   MAGGADLAVPPIGSKNIMESNQEPNRGNYRRPGIEAILMSPKLPKSVPPVSSAVEGETIR 60

Query: 484 RPRGRPAGSKNKPKPPIIITRDSANSLRAQALEINSGRDICESLLNFSRRKQRGISVLSA 305
           RPRGRPAGSKNKPKPPII+TRDSAN+LRA A+E++SG D+ ESL NF+RR+QRGI VLS 
Sbjct: 61  RPRGRPAGSKNKPKPPIIVTRDSANALRAHAMEVSSGCDVSESLANFARRRQRGICVLSG 120

Query: 304 TGCVTNVTLRQPASSGSIVTLHGRFEILSLLGSVLPPPAPAGITGLSIFLXXXXXXXXXX 125
           +GCVTNVTLRQPASSG+IVTLHGRFEILSLLGS+LPPPAP GITGL+I+L          
Sbjct: 121 SGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGG 180

Query: 124 XXXXALIASGPVVIMAATFMNAAFDRLPLEVDD 26
               ALIASGPVVIMAA+FMNA FDRLPL+ D+
Sbjct: 181 GVVGALIASGPVVIMAASFMNATFDRLPLDEDE 213


>ref|XP_002307550.1| predicted protein [Populus trichocarpa] gi|222856999|gb|EEE94546.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  245 bits (625), Expect = 9e-63
 Identities = 130/178 (73%), Positives = 146/178 (82%), Gaps = 5/178 (2%)
 Frame = -1

Query: 520 AVLPYSS---GETIRRPRGRPAGSKNKPKPPIIITRDSANSLRAQALEINSGRDICESLL 350
           AV P SS   GET+RRPRGRPAGSKNKPKPPII+TRDSAN+LRA A+E++SG D+CESL 
Sbjct: 13  AVPPISSARGGETLRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAMEVSSGCDVCESLA 72

Query: 349 NFSRRKQRGISVLSATGCVTNVTLRQPASSGSIVTLHGRFEILSLLGSVLPPPAPAGITG 170
           NF+RRKQRGISVLS +GCVTNVTLRQPASSG+IVTLHGRFEILSLLGSVLPPPAP GITG
Sbjct: 73  NFARRKQRGISVLSGSGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSVLPPPAPQGITG 132

Query: 169 LSIFLXXXXXXXXXXXXXXALIASGPVVIMAATFMNAAFDRLPLEVD--DDECENQQY 2
           L+I+L              ALIASGPVVIMAA+FMNA+FDRLPL+ D      +NQ Y
Sbjct: 133 LTIYLAGAQGQVVGGVVVGALIASGPVVIMAASFMNASFDRLPLDEDGITAAVQNQHY 190


>gb|AGC22550.1| male sterility related AT-hook DNA binding protein [Brassica
           oleracea]
          Length = 260

 Score =  244 bits (624), Expect = 1e-62
 Identities = 139/221 (62%), Positives = 158/221 (71%), Gaps = 13/221 (5%)
 Frame = -1

Query: 625 MAGGAELTLPSQSTKGSM--------ENIHGIDFGGLMVTPKSAVLPYSS--GETIRRPR 476
           MAGG  LT  S  +K  +        E  +  +   L   PK AV P SS  G  ++RPR
Sbjct: 1   MAGGTALTPTSVGSKSLLPLRNHEAAERANNNNNNSLKALPK-AVQPVSSIEGGMVKRPR 59

Query: 475 GRPAGSKNKPKPPIIITRDSANSLRAQALEINSGRDICESLLNFSRRKQRGISVLSATGC 296
           GRPAGSKNKPKPPII+T DS NSLRA A+EI+SG DICE+L +FSRRKQRG+ +LSA GC
Sbjct: 60  GRPAGSKNKPKPPIIVTHDSPNSLRAHAVEISSGNDICEALSDFSRRKQRGLCILSANGC 119

Query: 295 VTNVTLRQPASSGSIVTLHGRFEILSLLGSVLPPPAPAGITGLSIFLXXXXXXXXXXXXX 116
           VTNVTLRQPASSG+IVTLHGRFEILSLLGS+LPPPAP GITGL+I+L             
Sbjct: 120 VTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPLGITGLTIYLAGHQGQVVGGGVV 179

Query: 115 XALIASGPVVIMAATFMNAAFDRLPLEVDDDE---CENQQY 2
             LIASGPVVIMAA+FMNA FDRLPL  DDDE    +NQQY
Sbjct: 180 GGLIASGPVVIMAASFMNAVFDRLPL--DDDESASMQNQQY 218


>ref|NP_181822.1| AT-hook DNA-binding-like protein [Arabidopsis thaliana]
           gi|4512661|gb|AAD21715.1| putative DNA binding protein
           [Arabidopsis thaliana] gi|20197862|gb|AAM15286.1|
           putative DNA binding protein [Arabidopsis thaliana]
           gi|38454168|gb|AAR20778.1| At2g42940 [Arabidopsis
           thaliana] gi|38604060|gb|AAR24773.1| At2g42940
           [Arabidopsis thaliana] gi|119657376|tpd|FAA00287.1| TPA:
           AT-hook motif nuclear localized protein 16 [Arabidopsis
           thaliana] gi|330255095|gb|AEC10189.1| AT-hook
           DNA-binding-like protein [Arabidopsis thaliana]
          Length = 257

 Score =  242 bits (618), Expect = 6e-62
 Identities = 138/218 (63%), Positives = 158/218 (72%), Gaps = 10/218 (4%)
 Frame = -1

Query: 625 MAGGAELTLPSQSTKG-SMENIHGIDFGG----LMVTPKSAVLPYSS--GETIRRPRGRP 467
           MAGG  LT  S  +K   M N    + G     L   PK AV P SS  GE  +RPRGRP
Sbjct: 1   MAGGTALTPTSVGSKSVPMRNHEATERGNTNNNLRALPK-AVQPVSSIEGEMAKRPRGRP 59

Query: 466 AGSKNKPKPPIIITRDSANSLRAQALEINSGRDICESLLNFSRRKQRGISVLSATGCVTN 287
           AGSKNKPKPPII+T DS NSLRA A+EI+SG DICE+L +F+RRKQRG+ +LSA GCVTN
Sbjct: 60  AGSKNKPKPPIIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLCILSANGCVTN 119

Query: 286 VTLRQPASSGSIVTLHGRFEILSLLGSVLPPPAPAGITGLSIFLXXXXXXXXXXXXXXAL 107
           VTLRQPASSG+IVTLHGR+EILSLLGS+LPPPAP GITGL+I+L               L
Sbjct: 120 VTLRQPASSGAIVTLHGRYEILSLLGSILPPPAPLGITGLTIYLAGPQGQVVGGGVVGGL 179

Query: 106 IASGPVVIMAATFMNAAFDRLPLEVDDDEC---ENQQY 2
           IASGPVV+MAA+FMNA FDRLP+  DDDE    +NQQY
Sbjct: 180 IASGPVVLMAASFMNAVFDRLPM--DDDEAASMQNQQY 215


Top