BLASTX nr result
ID: Lithospermum22_contig00030863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00030863
(668 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 96 2e-36
gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi... 96 2e-36
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 93 3e-36
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 92 6e-36
ref|NP_001059757.1| Os07g0510800 [Oryza sativa Japonica Group] g... 89 1e-35
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 95.9 bits (237), Expect(2) = 2e-36
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = -1
Query: 668 ENRPLAYINKSWNMTQGGLLVYEKELLDVILAISKWWHYLMSG*FIIRTD*QSLKHLLE* 489
E PLAYI++ Q L +YEKELL VI A+ KW HYL+ FII+TD +SLK+LLE
Sbjct: 914 EGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTDQRSLKYLLEQ 973
Query: 488 KVTTYLQ*KAVAKLLGLDYLIQYKQGRDNLVADA 387
++ T +Q + + KLL DY IQY+QG++N+VADA
Sbjct: 974 RLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADA 1007
Score = 82.8 bits (203), Expect(2) = 2e-36
Identities = 39/117 (33%), Positives = 67/117 (57%)
Frame = -3
Query: 354 MIISTTQLLRMNEIQDTYLQDQAIQHILAGIIIKPEAFPPYQYKEGILKHKWRIVIEAHK 175
M ++ + + +IQ Y D +Q I+ + P++ + + + IL+ K +IV+ A+
Sbjct: 1019 MAMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPAND 1078
Query: 174 VLKSKLIRALHDSTVGGHSGMAVTYNNVKSLFYWKGLKKDVTTFVSFCDIYQKSKHE 4
+K+ ++ LH S VGGHSG VT+ VK LFYWKG+ KD+ ++ C Q+ K +
Sbjct: 1079 NIKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSD 1135
>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 780
Score = 96.3 bits (238), Expect(2) = 2e-36
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = -1
Query: 668 ENRPLAYINKSWNMTQGGLLVYEKELLDVILAISKWWHYLMSG*FIIRTD*QSLKHLLE* 489
E PLA+I++ Q L +YEKELL VI + KW HYL+S FII+TD +SLK+LLE
Sbjct: 305 EGHPLAFISRQLKGKQLHLSIYEKELLAVIFVVRKWRHYLISSHFIIKTDQRSLKYLLEQ 364
Query: 488 KVTTYLQ*KAVAKLLGLDYLIQYKQGRDNLVADA 387
++ T +Q + + KLL DY IQYKQG++NLVADA
Sbjct: 365 RLNTPIQQQWLPKLLEFDYEIQYKQGKENLVADA 398
Score = 82.4 bits (202), Expect(2) = 2e-36
Identities = 41/117 (35%), Positives = 67/117 (57%)
Frame = -3
Query: 354 MIISTTQLLRMNEIQDTYLQDQAIQHILAGIIIKPEAFPPYQYKEGILKHKWRIVIEAHK 175
M +S + + EIQ Y+ D IQ I+ + + ++ Y + +G+L+ K +IV+ +
Sbjct: 410 MALSVVECDLLKEIQAGYVTDGDIQGIITILQQQADSKKHYTWSQGVLRRKNKIVVPNNS 469
Query: 174 VLKSKLIRALHDSTVGGHSGMAVTYNNVKSLFYWKGLKKDVTTFVSFCDIYQKSKHE 4
+K ++R LH S +GGHSG VT+ VK LFYWK + KD+ F+ C Q+ K +
Sbjct: 470 GIKDTILRWLHCSGMGGHSGKEVTHQRVKGLFYWKSMVKDIQAFIRSCGTCQQCKSD 526
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 93.2 bits (230), Expect(2) = 3e-36
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Frame = -3
Query: 351 IISTTQLLR--MNEIQDTYLQDQAIQHILAGIIIKPEAFPPYQYKEGILKHKWRIVIEAH 178
+ STT ++ + EI +Y D + + + I P+ PPY GIL++K R+ + A
Sbjct: 828 LFSTTIIVPTWITEILASYATDPKCTALESQLRITPQGHPPYTLTSGILRYKNRLYVGAG 887
Query: 177 KVLKSKLIRALHDSTVGGHSGMAVTYNNVKSLFYWKGLKKDVTTFVSFCDIYQKSKHE 4
L++KL ++ HDS +GGHSG TY K LFYW G+KKD+ ++V C + QK+K E
Sbjct: 888 TDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSE 945
Score = 84.7 bits (208), Expect(2) = 3e-36
Identities = 43/93 (46%), Positives = 60/93 (64%)
Frame = -1
Query: 665 NRPLAYINKSWNMTQGGLLVYEKELLDVILAISKWWHYLMSG*FIIRTD*QSLKHLLE*K 486
NRPLAY +K+ GL Y+KE L ++ A+ KW HY + IIRTD SLK++ E +
Sbjct: 726 NRPLAYFSKAIGPKAAGLSTYDKEALAILEALKKWKHYFLGTSLIIRTDQASLKYINEQR 785
Query: 485 VTTYLQ*KAVAKLLGLDYLIQYKQGRDNLVADA 387
+T +Q K + KLL DY I+YK+G++N ADA
Sbjct: 786 LTEGIQHKLLIKLLSYDYKIEYKKGKENKAADA 818
>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 92.4 bits (228), Expect(2) = 6e-36
Identities = 45/115 (39%), Positives = 67/115 (58%)
Frame = -3
Query: 348 ISTTQLLRMNEIQDTYLQDQAIQHILAGIIIKPEAFPPYQYKEGILKHKWRIVIEAHKVL 169
IS Q + + E+ ++Y+ D Q +L + I + G++K K RI + A+ L
Sbjct: 1042 ISIAQPVWVQEVVNSYVVDNQAQSLLTELAIMSPNASGFSLVHGLIKKKGRIWLGANSAL 1101
Query: 168 KSKLIRALHDSTVGGHSGMAVTYNNVKSLFYWKGLKKDVTTFVSFCDIYQKSKHE 4
+K+I + HDS +GGHSG+ TY+ VK LF WKGLK V F+ C + QK+KHE
Sbjct: 1102 HTKIISSFHDSAIGGHSGVMATYHRVKKLFVWKGLKHSVEEFIQQCVVCQKAKHE 1156
Score = 84.7 bits (208), Expect(2) = 6e-36
Identities = 44/94 (46%), Positives = 62/94 (65%)
Frame = -1
Query: 668 ENRPLAYINKSWNMTQGGLLVYEKELLDVILAISKWWHYLMSG*FIIRTD*QSLKHLLE* 489
E P+A+ +K+ + L +YEKE L +++AI KW YL+ G F+IRTD QSL HL +
Sbjct: 936 EGHPVAFYSKALGINNQKLSIYEKEFLAIMMAIDKWRPYLLRGPFVIRTDHQSLCHLDDQ 995
Query: 488 KVTTYLQ*KAVAKLLGLDYLIQYKQGRDNLVADA 387
+ + LQ KA+ KL+GL Y QYK+G +N ADA
Sbjct: 996 LLGSELQRKAMTKLIGLQYKFQYKRGAENKSADA 1029
>ref|NP_001059757.1| Os07g0510800 [Oryza sativa Japonica Group]
gi|113611293|dbj|BAF21671.1| Os07g0510800 [Oryza sativa
Japonica Group]
Length = 517
Score = 89.0 bits (219), Expect(2) = 1e-35
Identities = 39/107 (36%), Positives = 67/107 (62%)
Frame = -3
Query: 324 MNEIQDTYLQDQAIQHILAGIIIKPEAFPPYQYKEGILKHKWRIVIEAHKVLKSKLIRAL 145
+ E+Q+ YL D +L+ + ++ A P + ++GIL +K +I I + L+ +++ AL
Sbjct: 408 LTEVQEGYLSDPYSADLLSKVTLQASAVPNFSLRDGILHYKNKIWIGNNTTLQHRILSAL 467
Query: 144 HDSTVGGHSGMAVTYNNVKSLFYWKGLKKDVTTFVSFCDIYQKSKHE 4
H +GGHSG+ VTY+ +K LF W+GLKK V F+ C + +++K E
Sbjct: 468 HSGAIGGHSGVQVTYSRIKKLFAWQGLKKSVLEFIDQCSVCKQAKAE 514
Score = 87.0 bits (214), Expect(2) = 1e-35
Identities = 45/91 (49%), Positives = 62/91 (68%)
Frame = -1
Query: 659 PLAYINKSWNMTQGGLLVYEKELLDVILAISKWWHYLMSG*FIIRTD*QSLKHLLE*KVT 480
PLA+++K+ GL +YEKE L ++LA+ +W YL G F+IRTD +SL HL + K+
Sbjct: 295 PLAFLSKALGPRNRGLSIYEKECLAILLAVDRWRSYLQFGEFVIRTDQRSLIHLGDQKLA 354
Query: 479 TYLQ*KAVAKLLGLDYLIQYKQGRDNLVADA 387
T Q KA+ KLLGL+Y + YK+G DN ADA
Sbjct: 355 TPWQQKAMTKLLGLNYRLVYKRGLDNRAADA 385