BLASTX nr result

ID: Lithospermum22_contig00030815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030815
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   106   2e-21
gb|AFK38839.1| unknown [Lotus japonicus]                              103   2e-20
ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like...    97   1e-18
ref|XP_002517352.1| zinc finger protein, putative [Ricinus commu...    94   1e-17
ref|XP_002511421.1| conserved hypothetical protein [Ricinus comm...    84   1e-14

>ref|XP_003633831.1| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 188

 Score =  106 bits (264), Expect = 2e-21
 Identities = 52/96 (54%), Positives = 65/96 (67%)
 Frame = +3

Query: 90  RVAERGSLASSTMSREDIAKLPSFRYKDNIITFRNSKEERMMKNIGNPKECAVCLENLKE 269
           R+ ERG+  S++MS +D+ KLP F ++        +KE    K   +P +CAVCL+N K 
Sbjct: 37  RMVERGNPRSTSMSLDDLDKLPCFHFQ--------AKE----KGSSSPVDCAVCLDNFKM 84

Query: 270 GDKCRLLPFCKHSFHADCVDVWLLKSTRCPICRTSA 377
           GDKCRLLP C HSFHA CVD WLLK+  CPICRTSA
Sbjct: 85  GDKCRLLPLCNHSFHAQCVDSWLLKTPICPICRTSA 120


>gb|AFK38839.1| unknown [Lotus japonicus]
          Length = 188

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/97 (52%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +3

Query: 93  VAERGSLASSTMSREDIAKLPSFRY--KDNIITFRNSKEERMMKNIGNPKECAVCLENLK 266
           + ERG+    +MS++D+ KLP + Y  KDN              +  +P +CAVCLENL 
Sbjct: 53  MTERGANGGRSMSKKDLEKLPCYDYVAKDN--------------STCSPVDCAVCLENLT 98

Query: 267 EGDKCRLLPFCKHSFHADCVDVWLLKSTRCPICRTSA 377
            GDKCRLLP CKHSFHA CVD WLLK+  CPICR+SA
Sbjct: 99  TGDKCRLLPVCKHSFHAQCVDTWLLKTPICPICRSSA 135


>ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
          Length = 146

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/95 (47%), Positives = 59/95 (62%)
 Frame = +3

Query: 93  VAERGSLASSTMSREDIAKLPSFRYKDNIITFRNSKEERMMKNIGNPKECAVCLENLKEG 272
           + +RG      MS++++ KLP F YK             + K   +P +CAVCLEN ++G
Sbjct: 38  MVQRGGSGGLGMSQDELKKLPCFEYK----------AVALEKASNSPVDCAVCLENFRKG 87

Query: 273 DKCRLLPFCKHSFHADCVDVWLLKSTRCPICRTSA 377
           DKCRLLP CKH FH+ C+D WLLK+  CPICRT A
Sbjct: 88  DKCRLLPNCKHFFHSQCIDSWLLKTPICPICRTCA 122


>ref|XP_002517352.1| zinc finger protein, putative [Ricinus communis]
           gi|223543363|gb|EEF44894.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 200

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/87 (52%), Positives = 58/87 (66%)
 Frame = +3

Query: 117 SSTMSREDIAKLPSFRYKDNIITFRNSKEERMMKNIGNPKECAVCLENLKEGDKCRLLPF 296
           ++++S +D+ KLPSF   D I   + S          +P +CAVCL+N + GDKCRLLP 
Sbjct: 48  TTSISADDLEKLPSF---DFIAKGKGS----------SPVDCAVCLDNFRAGDKCRLLPI 94

Query: 297 CKHSFHADCVDVWLLKSTRCPICRTSA 377
           CKHSFHA CVD WLLK+  CPICR SA
Sbjct: 95  CKHSFHAQCVDEWLLKTPICPICRASA 121


>ref|XP_002511421.1| conserved hypothetical protein [Ricinus communis]
           gi|223550536|gb|EEF52023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 189

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
 Frame = +3

Query: 105 GSLASST-----MSREDIAKLPSFRYKDNIITFRNSKEERMMKNIGNPKECAVCLENLKE 269
           GS +SS      +S E++  LP F YK               K   +  +C VCLEN   
Sbjct: 44  GSFSSSRYGIKKISNEELKNLPCFDYK------------AAEKEGSSSSDCVVCLENFNV 91

Query: 270 GDKCRLLPFCKHSFHADCVDVWLLKSTRCPICRT 371
           GDKC+LLP CKHSFH+ C+D WL+K+  CPICRT
Sbjct: 92  GDKCKLLPNCKHSFHSQCIDSWLVKTPICPICRT 125


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