BLASTX nr result

ID: Lithospermum22_contig00030755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030755
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523906.1| RNA-binding region-containing protein, putat...   147   1e-33
emb|CBI31519.3| unnamed protein product [Vitis vinifera]              137   2e-31
ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|1...   139   3e-31
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...   138   7e-31
ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29

>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  147 bits (371), Expect = 1e-33
 Identities = 84/167 (50%), Positives = 98/167 (58%), Gaps = 32/167 (19%)
 Frame = +2

Query: 2   AKKACEDASPMINGRRANCNLASLGAKRPRATTQG-----PRPTSPQQGPNVARQRANAS 166
           AKKACEDA+PMINGRRANCNLASLGA+RPR+ TQ      P P  PQQG N  ++ ++A 
Sbjct: 70  AKKACEDATPMINGRRANCNLASLGARRPRSATQAPPPQPPPPPPPQQGSNHGQRPSSA- 128

Query: 167 PAPANHVQWYY----XXXXXXXXXXXXXXXXYGYPPAYITPDMTYNH---HKGGSY---- 313
            APANHVQWYY                    YGY P Y+  D++YNH   + GGSY    
Sbjct: 129 -APANHVQWYYPAGSPASPYHHHHHHQAVPFYGYTPTYVATDISYNHKLSYTGGSYMNGH 187

Query: 314 ---------------LMPMYPFYHYNQPHTMGLPAHMFSDTTA-PIT 406
                          LMPMYP YH++Q  TMGLPAH+F  TTA PIT
Sbjct: 188 FSQVYPGQAIMGANTLMPMYPLYHFHQSQTMGLPAHIFPQTTAGPIT 234


>emb|CBI31519.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  137 bits (346), Expect(2) = 2e-31
 Identities = 79/162 (48%), Positives = 91/162 (56%), Gaps = 25/162 (15%)
 Frame = +2

Query: 2   AKKACEDASPMINGRRANCNLASLGAKRPRATTQGPRPTSPQQGPNVARQRANASPAPAN 181
           AKKACEDA+PMINGRRANCNLASLGA+RPR+       T P QG N   +  +A  APA+
Sbjct: 39  AKKACEDATPMINGRRANCNLASLGARRPRSAASS---TPPHQGSNGGSRPTSA--APAS 93

Query: 182 HVQWYY---XXXXXXXXXXXXXXXXYGYPPAYITPDMTYNH---HKGGSY---------- 313
           HVQWYY                   YGY PAYI  D++YNH   + GGSY          
Sbjct: 94  HVQWYYPAGTPAPPFHHQHHQAVPFYGYSPAYIAADISYNHKLSYTGGSYMNGHFSQVYP 153

Query: 314 ---------LMPMYPFYHYNQPHTMGLPAHMFSDTTAPITPS 412
                    LMPMYPFYH++Q  TMG PAHMF  TT    P+
Sbjct: 154 GQAMVGANALMPMYPFYHFHQSQTMGHPAHMFPPTTVGPMPT 195



 Score = 23.9 bits (50), Expect(2) = 2e-31
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 396 PQ*LHPNTVCLAVE 437
           P  + PNTVCLAVE
Sbjct: 203 PTSMAPNTVCLAVE 216


>ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1|
           unknown [Populus trichocarpa]
           gi|222864314|gb|EEF01445.1| predicted protein [Populus
           trichocarpa]
          Length = 253

 Score =  139 bits (351), Expect = 3e-31
 Identities = 82/164 (50%), Positives = 93/164 (56%), Gaps = 29/164 (17%)
 Frame = +2

Query: 2   AKKACEDASPMINGRRANCNLASLGAKRPRATTQGPRPTSPQQGPNVARQRANASPAPAN 181
           AKKACEDASP+INGRRANCNLASLGA+RPR+ T    P  PQQGPN+     +   APAN
Sbjct: 71  AKKACEDASPIINGRRANCNLASLGARRPRSAT----PAPPQQGPNINAGPRSTPAAPAN 126

Query: 182 HVQWYY-----XXXXXXXXXXXXXXXXYGYPPAYITPDMTYNH---HKGGSY-------- 313
           HVQWYY                     YGY PAYI  D + NH   + GGSY        
Sbjct: 127 HVQWYYPAGSAAAASPFHHQHHQAVPFYGYSPAYIATDTSGNHKLNYTGGSYMNGHFSQV 186

Query: 314 -----------LMPMYPFYHYNQPHTMGLP-AHMFSDTTA-PIT 406
                      LMPMYPFYH++Q   MGLP AH+F  TTA P+T
Sbjct: 187 YPGQAMVGANTLMPMYPFYHFHQSQAMGLPAAHIFPPTTAGPMT 230


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score =  138 bits (348), Expect = 7e-31
 Identities = 81/178 (45%), Positives = 95/178 (53%), Gaps = 25/178 (14%)
 Frame = +2

Query: 2   AKKACEDASPMINGRRANCNLASLGAKRPRATTQGPRPTSPQQGPNVARQRANASPAPAN 181
           AKKACEDA+PMINGRRANCNLASLGA+RPR+       T P QG N   +  +A  APA+
Sbjct: 70  AKKACEDATPMINGRRANCNLASLGARRPRSAASS---TPPHQGSNGGSRPTSA--APAS 124

Query: 182 HVQWYY---XXXXXXXXXXXXXXXXYGYPPAYITPDMTYNH---HKGGSY---------- 313
           HVQWYY                   YGY PAYI  D++YNH   + GGSY          
Sbjct: 125 HVQWYYPAGTPAPPFHHQHHQAVPFYGYSPAYIAADISYNHKLSYTGGSYMNGHFSQVYP 184

Query: 314 ---------LMPMYPFYHYNQPHTMGLPAHMFSDTTAPITPSQHSLFGCGIGTVGNAG 460
                    LMPMYPFYH++Q  TMG PAHMF  TT    P+  ++         N G
Sbjct: 185 GQAMVGANALMPMYPFYHFHQSQTMGHPAHMFPPTTVGPMPTVPAIISKPTSMAPNTG 242


>ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  134 bits (338), Expect = 1e-29
 Identities = 77/163 (47%), Positives = 92/163 (56%), Gaps = 28/163 (17%)
 Frame = +2

Query: 2   AKKACEDASPMINGRRANCNLASLGAKRPRATTQGPRPTSPQQGPNVARQRANASPAPAN 181
           A KACEDA+P+INGRRANCNLASLGA+RPR++T    P  PQQGPN+     +    PAN
Sbjct: 70  ANKACEDAAPIINGRRANCNLASLGARRPRSST----PAPPQQGPNIIAGPRSTPAPPAN 125

Query: 182 HVQWYY----XXXXXXXXXXXXXXXXYGYPPAYITPDMTYNH---HKGGSY--------- 313
           HVQWYY                    YGY PAYI  D++YNH   + GGSY         
Sbjct: 126 HVQWYYPAGSAAASPFHHQHHQAVPFYGYSPAYIATDISYNHKLSYTGGSYMNGHFSQVY 185

Query: 314 ----------LMPMYPFYHYNQPHTMGLP-AHMFSDTTA-PIT 406
                     LMPMYP YH++Q   +GLP AH+F   TA P+T
Sbjct: 186 PGQAMVGANTLMPMYPLYHFHQSQAVGLPAAHIFPPNTAGPMT 228


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