BLASTX nr result

ID: Lithospermum22_contig00030718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030718
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05905.1| reverse transcriptase, related [Medicago truncatula]    61   1e-07
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_003622921.1| hypothetical protein MTR_7g058360 [Medicago ...    58   9e-07

>gb|ABN05905.1| reverse transcriptase, related [Medicago truncatula]
          Length = 328

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/96 (30%), Positives = 45/96 (46%)
 Frame = +1

Query: 1   LMNAKGMEVFPLLSVRHLARTTSDHSPLLVHARTQYEGKKGAFRFQSMWIKHAGLEQVVN 180
           + N + M+    ++   L R  SDH P+L++ +         F+F  MW  H   ++V+ 
Sbjct: 158 ICNQRWMDFVSSVNCSTLIRNQSDHYPILLYFQLTNHKFSSQFKFLKMWSLHENCKEVIQ 217

Query: 181 DCWNRPVFGEPMVILCSXXXXXXXXXXXWNIDVFGN 288
           D W+ PV G PM +L             WN +VFGN
Sbjct: 218 DSWSLPVIGCPMFVLSKKLQTLEIRLKCWNKEVFGN 253


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 1/155 (0%)
 Frame = +1

Query: 1    LMNAKGMEVFPLLSVRHLARTTSDHSPLLVHARTQYEGKKGAFRFQSMWIKHAGLEQVVN 180
            L+N K    FPL   R L    SDHSP++V      + KK  FRF  MW+ H     +V 
Sbjct: 580  LVNEKWNLKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVK 639

Query: 181  DCWNRPVFGEPMVILCSXXXXXXXXXXXWNIDVFGNXXXXXXXXXXXXXXXXKIFEDTNT 360
              W++   G PM  LC            +N+  F N                +     + 
Sbjct: 640  KVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQQALHTAHE 699

Query: 361  D-XXXXXXXXXXXXHVHNLEIEEEFLRQKSRIKWI 462
            +             +   +  EE F +QK+RI+W+
Sbjct: 700  NPILCMRERDVVHKYASTVRAEESFFKQKARIQWL 734


>ref|XP_003622921.1| hypothetical protein MTR_7g058360 [Medicago truncatula]
           gi|355497936|gb|AES79139.1| hypothetical protein
           MTR_7g058360 [Medicago truncatula]
          Length = 275

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/96 (30%), Positives = 41/96 (42%)
 Frame = +1

Query: 1   LMNAKGMEVFPLLSVRHLARTTSDHSPLLVHARTQYEGKKGAFRFQSMWIKHAGLEQVVN 180
           + N   +++    S   L +T SDH PLL+H  T       +F+F  MW  H   +  + 
Sbjct: 85  ICNQAWLDMCQSTSCSTLIKTKSDHYPLLLHFETADSTFASSFKFLKMWSLHDNCKDAIA 144

Query: 181 DCWNRPVFGEPMVILCSXXXXXXXXXXXWNIDVFGN 288
            CW   + G PM IL             WN + FGN
Sbjct: 145 SCWKTTITGCPMFILTKKLLLLKQRLEIWNKETFGN 180


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