BLASTX nr result

ID: Lithospermum22_contig00030703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030703
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Sela...    93   3e-17
ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Sela...    88   8e-16
ref|XP_002512699.1| pentatricopeptide repeat-containing protein,...    83   3e-14
ref|XP_002991622.1| hypothetical protein SELMODRAFT_451234 [Sela...    79   3e-13

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/104 (47%), Positives = 67/104 (64%)
 Frame = -2

Query: 316 LAFVTVITACGMMKSLREGRHVHRIVKECGMDTDVLVCNALLKMYTDCGSVQDCRVVFYG 137
           LA VT I ACGM+KSL+EGR+VH I K+CG++ DVLV N+LLKMY DCGS++D R VF  
Sbjct: 195 LALVTAIVACGMLKSLQEGRYVHEIAKKCGLEADVLVSNSLLKMYIDCGSIKDARAVFDR 254

Query: 136 MECRDAISDTLPWNSLIETHLCKNELHHVPSIYHRMLLRGVHPD 5
           M  +D IS    W  +   ++     +    ++ +M + GV PD
Sbjct: 255 MPSKDVIS----WTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPD 294


>ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
           gi|300157279|gb|EFJ23905.1| hypothetical protein
           SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/104 (42%), Positives = 62/104 (59%)
 Frame = -2

Query: 316 LAFVTVITACGMMKSLREGRHVHRIVKECGMDTDVLVCNALLKMYTDCGSVQDCRVVFYG 137
           + F+T++ AC  + +L EGR +H  V E G DTD++VCNAL+  Y  CGS+ D ++VF G
Sbjct: 114 VTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDG 173

Query: 136 MECRDAISDTLPWNSLIETHLCKNELHHVPSIYHRMLLRGVHPD 5
           M  RD IS    W+S+I     +  +     +YHRML  G  PD
Sbjct: 174 MRRRDVIS----WSSMISAFAQRGRVDEAMELYHRMLSEGTLPD 213


>ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
           gi|300154888|gb|EFJ21522.1| hypothetical protein
           SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/104 (40%), Positives = 61/104 (58%)
 Frame = -2

Query: 316 LAFVTVITACGMMKSLREGRHVHRIVKECGMDTDVLVCNALLKMYTDCGSVQDCRVVFYG 137
           + F+T++ AC  + +L EGR +H  V E G DTD++V NAL+  Y  CG++ D ++VF G
Sbjct: 281 VTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDG 340

Query: 136 MECRDAISDTLPWNSLIETHLCKNELHHVPSIYHRMLLRGVHPD 5
           M  RD IS    W+S+I     +  +     +YHRML  G  PD
Sbjct: 341 MRRRDVIS----WSSMISAFAQRGRVDEAMELYHRMLSEGTLPD 380


>ref|XP_002512699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548660|gb|EEF50151.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 686

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 36/104 (34%), Positives = 61/104 (58%)
 Frame = -2

Query: 316 LAFVTVITACGMMKSLREGRHVHRIVKECGMDTDVLVCNALLKMYTDCGSVQDCRVVFYG 137
           +A  T + ACGM++S+  G+ +H   K+C ++ D+LV N+LLKMY DC  ++D R  F+ 
Sbjct: 199 VALATALRACGMLRSMHHGKILHGFAKKCRLEFDILVSNSLLKMYVDCHCIEDARATFHQ 258

Query: 136 MECRDAISDTLPWNSLIETHLCKNELHHVPSIYHRMLLRGVHPD 5
           M  +D IS    W  +I  ++   E +    ++ +M + G+ PD
Sbjct: 259 MPTKDIIS----WTEIINGYVKIGEFNEALKLFRQMNIAGIRPD 298


>ref|XP_002991622.1| hypothetical protein SELMODRAFT_451234 [Selaginella moellendorffii]
           gi|300140655|gb|EFJ07376.1| hypothetical protein
           SELMODRAFT_451234 [Selaginella moellendorffii]
          Length = 459

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/104 (37%), Positives = 59/104 (56%)
 Frame = -2

Query: 316 LAFVTVITACGMMKSLREGRHVHRIVKECGMDTDVLVCNALLKMYTDCGSVQDCRVVFYG 137
           + F T +TAC  +++L EGR +HR   E G+++  +V NAL+ MY  CGS++D + VF G
Sbjct: 39  ITFATALTACASLEALEEGREIHRKTVEAGLESVTMVRNALVTMYARCGSLEDAQGVFTG 98

Query: 136 MECRDAISDTLPWNSLIETHLCKNELHHVPSIYHRMLLRGVHPD 5
              RD +S    W++LI  H    +      +Y RM L G+  D
Sbjct: 99  TVDRDVVS----WSALIAAHAQHGQDLEAIKVYRRMNLEGIEAD 138



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/104 (32%), Positives = 51/104 (49%)
 Frame = -2

Query: 316 LAFVTVITACGMMKSLREGRHVHRIVKECGMDTDVLVCNALLKMYTDCGSVQDCRVVFYG 137
           L F +V+ AC  +  +  GR +H  V   G   D++V NAL+ MY  CG++ + R VF G
Sbjct: 243 LTFASVLAACSNLGEISRGRELHYDVAASGFAEDLIVQNALVDMYGKCGNLVESRNVFEG 302

Query: 136 MECRDAISDTLPWNSLIETHLCKNELHHVPSIYHRMLLRGVHPD 5
           ++ R  IS    W S++  +           +  RM L GV  D
Sbjct: 303 IKSRSVIS----WTSMVTAYARHGHGAEAVELVWRMSLEGVEAD 342


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