BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030588
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S...    50   1e-07
gb|ABN07997.1| contains similarity to reverse trancriptase , rel...    49   4e-07
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    41   5e-07
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    41   2e-06
gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    43   3e-06

>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
           gi|241941323|gb|EES14468.1| hypothetical protein
           SORBIDRAFT_07g002160 [Sorghum bicolor]
          Length = 469

 Score = 49.7 bits (117), Expect(2) = 1e-07
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +1

Query: 7   AGEWDRKRVERMVEGENIQNVLSIPLSLRDTKDRLIWSHTRCGNYLTCLGYKCAQSIKKN 186
           +GEWDR  V  +    +++N+LSIPL   + +D L W +   G++     Y     +K+ 
Sbjct: 133 SGEWDRNLVTDIFWEADVKNILSIPLK-NEMEDTLAWHYDPKGDFSVKSAYHVLTDMKEL 191

Query: 187 AKLRTKEVGEGSRHEVG--GRGWKEV*QLRVPSRVKQFY 297
           +K R  ++GE S   +      W ++ +L  P +VK F+
Sbjct: 192 SKRR--QIGEASASLISPCNNNWHKIWKLHCPPKVKLFF 228



 Score = 31.2 bits (69), Expect(2) = 1e-07
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = +3

Query: 285 KTILWKCLHDILPTKSNLLKKGVVMESNYLFYNSKSEIILHLLLECPFTCMLWYA 449
           K   W+  H+ LP + N+L++G+ +++        +E   H  L C F    W A
Sbjct: 225 KLFFWRFTHNSLPLRMNILRRGMDIDTRCPVCWRLNEDGGHCFLRCKFVKKCWRA 279


>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 21/57 (36%), Positives = 35/57 (61%)
 Frame = +3

Query: 285 KTILWKCLHDILPTKSNLLKKGVVMESNYLFYNSKSEIILHLLLECPFTCMLWYASS 455
           K +LW+ L+D LP +S+L K+G+         +SK+E I HL + CP +  +W+ S+
Sbjct: 336 KVLLWRILNDSLPVRSSLRKRGIQCYPLCPRCHSKTETITHLFMSCPLSKRVWFGSN 392



 Score = 30.4 bits (67), Expect(2) = 4e-07
 Identities = 22/91 (24%), Positives = 35/91 (38%)
 Frame = +1

Query: 16  WDRKRVERMVEGENIQNVLSIPLSLRDTKDRLIWSHTRCGNYLTCLGYKCAQSIKKNAKL 195
           W++  +E      NI  +  IPL      D L+W H   G Y    GY   ++       
Sbjct: 252 WNKVILEDQFISINIDQISHIPLVNTTNPDSLMWMHNPTGIYSVKSGYNTLRT------W 305

Query: 196 RTKEVGEGSRHEVGGRGWKEV*QLRVPSRVK 288
           +T+++   S        WK++  L    R K
Sbjct: 306 QTQQINNTSTSSDETLIWKKIWSLHTIPRHK 336


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 41.2 bits (95), Expect(2) = 5e-07
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = +3

Query: 294  LWKCLHDILPTKSNLLKKGVVMESNYLFYNSKSEIILHLLLECPFTCMLWYAS 452
            LW+C+++ L   SNL  + +  E + +   S  E + HLL +CPF  + W  S
Sbjct: 1067 LWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAIS 1119



 Score = 37.4 bits (85), Expect(2) = 5e-07
 Identities = 24/94 (25%), Positives = 44/94 (46%)
 Frame = +1

Query: 13   EWDRKRVERMVEGENIQNVLSIPLSLRDTKDRLIWSHTRCGNYLTCLGYKCAQSIKKNAK 192
            +W+   V  +      +N+L++    ++T+DR  W ++R G+Y    GY     I  N +
Sbjct: 978  DWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEI-INQR 1036

Query: 193  LRTKEVGEGSRHEVGGRGWKEV*QLRVPSRVKQF 294
               +EV + S   +  + WK    L VP ++  F
Sbjct: 1037 NNPQEVLQPSLDPIFQQIWK----LDVPPKIHHF 1066


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 24/92 (26%), Positives = 39/92 (42%)
 Frame = +1

Query: 10  GEWDRKRVERMVEGENIQNVLSIPLSLRDTKDRLIWSHTRCGNYLTCLGYKCAQSIKKNA 189
           GEWD  +V    +    Q +L IP+S    +D + W H + G +     Y  A+S    A
Sbjct: 542 GEWDEDKVFSFFDETTAQQILQIPVSAHGGEDFISWPHDKRGVFSVRSAYNLARSEIFMA 601

Query: 190 KLRTKEVGEGSRHEVGGRGWKEV*QLRVPSRV 285
                  G  S  +     WKE+ ++  P ++
Sbjct: 602 AQSENGRGMLSGLQESANRWKELWRINAPGKM 633



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 267 SGPFTSKTILWKCLHDILPTKSNLLKKGVVMESNYLFYNSKSEIILHLLLECPFTCMLW 443
           + P    T LW+ +HD LP+   L ++ +       F   + + I H+ L CPF   +W
Sbjct: 628 NAPGKMLTNLWRIVHDCLPSGFQLRRRHIPATDGCCFC-ERDDRIEHIFLLCPFAVCIW 685


>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 26/96 (27%), Positives = 42/96 (43%)
 Frame = +1

Query: 7    AGEWDRKRVERMVEGENIQNVLSIPLSLRDTKDRLIWSHTRCGNYLTCLGYKCAQSIKKN 186
            +G WD   ++ +    +   +L IP+S    +D + W HTR G +     Y C  + K  
Sbjct: 785  SGGWDEDLIDTLFWPIDANRILQIPISA-GREDFVAWHHTRSGIFSVRSAYHCQWNAKFG 843

Query: 187  AKLRTKEVGEGSRHEVGGRGWKEV*QLRVPSRVKQF 294
            +K R  +    S   V    WK    L +P ++K F
Sbjct: 844  SKERLPDGASSSSRPVWDNLWK----LEIPPKIKIF 875



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 285  KTILWKCLHDILPTKSNLLKKGVVMESNYLFYNSKSEIILHLLLECPFTCMLW 443
            K   W+ LH ++P K  L  K + ++      +S  E I H++  C    ++W
Sbjct: 873  KIFAWRMLHGVIPCKGILADKHIAVQGGCPVCSSGVEDIKHMVFTCRRAKLIW 925