BLASTX nr result

ID: Lithospermum22_contig00030496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030496
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [...    80   1e-13
gb|AFK38607.1| unknown [Lotus japonicus]                               67   2e-09
ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|NP_001242658.1| uncharacterized protein LOC100776896 [Glycin...    64   1e-08
ref|XP_002520859.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002275157.2| PREDICTED: reticulon-like protein B16-like [Vitis vinifera]
           gi|297736488|emb|CBI25359.3| unnamed protein product
           [Vitis vinifera]
          Length = 227

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 9/101 (8%)
 Frame = +3

Query: 84  MDSSEDVYSVELMLSSRRSDS-SFKLYDNQMMV------GAEVKVPWWQRR--SSGIVVV 236
           MDSSED  +  +   +  S    ++L+D +  +      G    V  W+RR  S G +VV
Sbjct: 1   MDSSEDPSNACVDGDASTSGGPGYRLFDRRSSIHQIMGGGKAADVLLWKRRRVSCGTIVV 60

Query: 237 ASIAWLFFECSGLSFLSVCCDILLIIVVMLFLRANYTGFKN 359
           A++AW+ FE SGLSFLS+C D+LLI++V+LFLRANY  F+N
Sbjct: 61  ATVAWILFERSGLSFLSICSDVLLILIVVLFLRANYAAFRN 101


>gb|AFK38607.1| unknown [Lotus japonicus]
          Length = 198

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = +3

Query: 162 DNQMMVGAEVKVPWWQRR--SSGIVVVASIAWLFFECSGLSFLSVCCDILLIIVVMLFLR 335
           D Q+       V  W+R   S G+++VA++AW+  E +GL FL++C D+LLI++V+LFL 
Sbjct: 5   DTQVPTAFVADVILWKRWPVSLGVILVATVAWILLEWTGLPFLTICSDVLLILIVLLFLH 64

Query: 336 ANYTGFKN 359
           ANY  F+N
Sbjct: 65  ANYAAFRN 72


>ref|XP_002325482.1| predicted protein [Populus trichocarpa] gi|222862357|gb|EEE99863.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 8/86 (9%)
 Frame = +3

Query: 126 SSRRSDSSFKLYDNQ----MMVGA----EVKVPWWQRRSSGIVVVASIAWLFFECSGLSF 281
           S R   S ++L+D Q     ++GA    +V +  W   S G+++VA+++W  FE SGL F
Sbjct: 33  SPRAITSGYRLFDRQDSLHQLMGAGKAADVLLWKWWHVSFGVIMVATVSWFIFERSGLPF 92

Query: 282 LSVCCDILLIIVVMLFLRANYTGFKN 359
           L++C D+LLI++V+LF+RAN     N
Sbjct: 93  LTICSDVLLILIVLLFVRANIADMIN 118


>ref|NP_001242658.1| uncharacterized protein LOC100776896 [Glycine max]
           gi|255640738|gb|ACU20653.1| unknown [Glycine max]
          Length = 198

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/54 (51%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
 Frame = +3

Query: 204 WQRR--SSGIVVVASIAWLFFECSGLSFLSVCCDILLIIVVMLFLRANYTGFKN 359
           W+R   S GI+VVA++AW+ FE + L FL++C D+LLI++V+LFL ANY   +N
Sbjct: 19  WKRWHVSLGIIVVATVAWVLFEWTSLPFLTICSDVLLILIVLLFLHANYAALRN 72


>ref|XP_002520859.1| conserved hypothetical protein [Ricinus communis]
           gi|223539990|gb|EEF41568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
 Frame = +3

Query: 126 SSRRSDSSFKLYDNQ------MMVGAEVKVPWWQRR--SSGIVVVASIAWLFFECSGLSF 281
           SS  S S ++L+  Q      M  G    V  W+R   S  ++++A++AW  FE SGL F
Sbjct: 26  SSCSSSSRYRLFGRQAPFQQFMGGGKAADVLLWKRWHVSFSVIIIATVAWFIFERSGLPF 85

Query: 282 LSVCCDILLIIVVMLFLRANYTGFKN 359
           L++C D+LL++ V+LF+ AN+   +N
Sbjct: 86  LTICSDVLLVVTVLLFIHANFAAIRN 111


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