BLASTX nr result

ID: Lithospermum22_contig00030485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030485
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889307.1| pentatricopeptide repeat-containing protein ...    67   2e-09
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...    66   3e-09
ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...    65   6e-09
emb|CBI36299.3| unnamed protein product [Vitis vinifera]               65   6e-09
gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thal...    63   3e-08

>ref|XP_002889307.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335148|gb|EFH65566.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 397

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/89 (42%), Positives = 49/89 (55%)
 Frame = +1

Query: 130 MLTLRIVRRFCAASTFTSAKNAVLCNGRNNVLKNSRNLLNVDQPVLFKLKKERDPEXXXX 309
           ML+LR++RRFC  S+  +   A +    N +    + L  +++P L KLK ERDPE    
Sbjct: 1   MLSLRLIRRFCHFSSSAATGIAYVSTDSNQI----QGLKPLEEPALVKLKSERDPEKLFK 56

Query: 310 XXXXXXXXXXXXENRFAFEDTVGRLAGAG 396
                       ENRFAFEDTV RLAGAG
Sbjct: 57  LFQANATNRLVIENRFAFEDTVSRLAGAG 85


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
           gi|449484169|ref|XP_004156805.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Cucumis sativus]
          Length = 399

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/88 (43%), Positives = 49/88 (55%)
 Frame = +1

Query: 130 MLTLRIVRRFCAASTFTSAKNAVLCNGRNNVLKNSRNLLNVDQPVLFKLKKERDPEXXXX 309
           ML+LR +RRFC A+T   + +         VL + +N  ++++P L KLK ERDPE    
Sbjct: 1   MLSLRPIRRFCHAATVIPSTDTTAA-----VLNHVQNSKSLEEPALVKLKAERDPEKLFH 55

Query: 310 XXXXXXXXXXXXENRFAFEDTVGRLAGA 393
                       ENRFAFEDTV RLAGA
Sbjct: 56  LFKANAHNRLVIENRFAFEDTVSRLAGA 83


>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
           mitochondrial-like [Vitis vinifera]
          Length = 405

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 130 MLTLRIVRRFCAASTFTSAKNAV--LCNGRNNVLKNSRNLLNVDQPVLFKLKKERDPEXX 303
           ML+LR +RRFC A+  T+       + + ++N +K     L  ++P L KLK ERDPE  
Sbjct: 1   MLSLRPIRRFCHAAAITAIAPVAETVTSAKSNCIKKPDKPL--EEPALVKLKAERDPERL 58

Query: 304 XXXXXXXXXXXXXXENRFAFEDTVGRLAGAG 396
                         ENRFAFEDTV RLAGAG
Sbjct: 59  FQLFKANAHNRLVVENRFAFEDTVSRLAGAG 89


>emb|CBI36299.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +1

Query: 130 MLTLRIVRRFCAASTFTSAKNAV--LCNGRNNVLKNSRNLLNVDQPVLFKLKKERDPEXX 303
           ML+LR +RRFC A+  T+       + + ++N +K     L  ++P L KLK ERDPE  
Sbjct: 1   MLSLRPIRRFCHAAAITAIAPVAETVTSAKSNCIKKPDKPL--EEPALVKLKAERDPERL 58

Query: 304 XXXXXXXXXXXXXXENRFAFEDTVGRLAGAG 396
                         ENRFAFEDTV RLAGAG
Sbjct: 59  FQLFKANAHNRLVVENRFAFEDTVSRLAGAG 89


>gb|AAD55488.1|AC009322_28 Hypothetical protein [Arabidopsis thaliana]
          Length = 419

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/89 (41%), Positives = 47/89 (52%)
 Frame = +1

Query: 130 MLTLRIVRRFCAASTFTSAKNAVLCNGRNNVLKNSRNLLNVDQPVLFKLKKERDPEXXXX 309
           ML+LR +RRFC   +  +   A +    N +    + L  +++P L KLK ERDPE    
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTESNQI----QGLKPLEEPALVKLKSERDPEKLYN 56

Query: 310 XXXXXXXXXXXXENRFAFEDTVGRLAGAG 396
                       ENRFAFEDTV RLAGAG
Sbjct: 57  LFKANATNRLVIENRFAFEDTVSRLAGAG 85


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