BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030484
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204...    49   1e-12
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript...    53   4e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    52   7e-10
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    51   3e-08
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        47   1e-07

>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
          Length = 282

 Score = 49.3 bits (116), Expect(3) = 1e-12
 Identities = 25/61 (40%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 647 RDRLIRWGMQVESGCVLCSG-IESQDHLFFQCSYSA*IWRLILQKLKAYMGTFIWQSEKQ 823
           R RL RW   +   C+LC G  ES+DHLFF C +   IW  IL    +   T  W  E  
Sbjct: 154 RGRLSRWDRSIPLSCLLCGGNYESRDHLFFSCHFGWEIWSRILLLKSSSHRTGYWGVELS 213

Query: 824 W 826
           W
Sbjct: 214 W 214



 Score = 37.0 bits (84), Expect(3) = 1e-12
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 498 SNGLFTQRSV*EDVRHKANKLPWAKWLWGRDGIPRHEFVVWL 623
           S+  F+  S  E +R  ++++ W+  LWG   IP+H F  WL
Sbjct: 104 SHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWL 145



 Score = 33.1 bits (74), Expect(3) = 1e-12
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 826 VYCKTWGMFLKRRLMRLTFMCTIYVVWQERGTR 924
           +Y +  G  ++R+L RL +  TIY +WQER  R
Sbjct: 215 IYNQGIGKSVRRKLWRLLWCATIYFIWQERNHR 247


>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
           (reverse transcriptase)-related family protein
           [Arabidopsis thaliana]
          Length = 295

 Score = 52.8 bits (125), Expect(2) = 4e-10
 Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +2

Query: 641 PIRDRLIRWGMQVESGCVLCS-GIESQDHLFFQCSYSA*IWRLILQKLK 784
           P RDRL  WGM + S  VLCS G E+  HLFF+CS+S  IW     K +
Sbjct: 153 PTRDRLRGWGMNIPSSWVLCSNGDETHAHLFFECSFSLAIWEFFASKFR 201



 Score = 38.1 bits (87), Expect(2) = 4e-10
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +3

Query: 510 FTQRSV*EDVRHKANKLPWAKWLWGRDGIPRHEFVVWLLFI 632
           F+ R   E +R  +  +PWAK +W ++ IPR   + W+ F+
Sbjct: 109 FSSRDTWEQIRVHSPTVPWAKVVWFKEYIPRFSLITWMSFL 149


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 51.6 bits (122), Expect(3) = 7e-10
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +2

Query: 629  HCKHPIRDRLIRWGMQVESGCVLCSG-IESQDHLFFQCSYSA*IWRLILQKLKAYMGTFI 805
            H + P  DR+I W   + + C+ C G +E++DHLFF CS+++ IW  + + +     T  
Sbjct: 1078 HGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSH 1137

Query: 806  WQS 814
            WQS
Sbjct: 1138 WQS 1140



 Score = 29.6 bits (65), Expect(3) = 7e-10
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 510  FTQRSV*EDVRHKANKLPWAKWLWGRDGIPRHEFVVWL 623
            F+ R      R  + ++PW K +W     P++ F  WL
Sbjct: 1038 FSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWL 1075



 Score = 28.1 bits (61), Expect(3) = 7e-10
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 865  LMRLTFMCTIYVVWQERGTR 924
            L R  F  TIY+VW+ER  R
Sbjct: 1157 LRRYVFQATIYIVWRERNGR 1176


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 51.2 bits (121), Expect(2) = 3e-08
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
 Frame = +2

Query: 647 RDRLIRWGMQVESGCVLCSGI-ESQDHLFFQCSYSA*IWRLIL 772
           RDRL +WG+ + + CVLC+ + E+ DHLFFQC +S  IW   +
Sbjct: 182 RDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSNEIWSFFM 224



 Score = 33.5 bits (75), Expect(2) = 3e-08
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 558 LPWAKWLWGRDGIPRHEFVVWL 623
           +PW K +W +D IP+H F+ W+
Sbjct: 152 VPWQKSVWFKDRIPKHAFICWV 173


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +2

Query: 647  RDRLIRWGMQVESGCVLCS-GIESQDHLFFQCSYSA*IWRLILQKL 781
            R RL  WG      CVLCS   ES+DHL   C +SA +WRL+ +++
Sbjct: 1079 RQRLASWGHIQSDACVLCSFASESRDHLLLICEFSAQVWRLVFRRI 1124



 Score = 35.4 bits (80), Expect(2) = 1e-07
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +3

Query: 471  EEQVDM-EWCSNGL----FTQRSV*EDVRHKANKLPWAKWLWGRDGIPRHEFVVWL 623
            +E VD  EW  NG     F+     E +R KA    WA  +W +  +P++ F +W+
Sbjct: 1015 QEDVDRYEWSVNGFLCQGFSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWV 1070