BLASTX nr result

ID: Lithospermum22_contig00030417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030417
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39748.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   218   3e-55
emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]   218   3e-55
ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|2...   218   5e-55
ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PAR...   211   6e-53

>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  218 bits (556), Expect = 3e-55
 Identities = 102/136 (75%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
 Frame = -3

Query: 406 SSSSSFTIKNVTKSNLEEALTDLRGHVKGADFVAIDLEMTGVKSAPWRESFDFDRFDIQY 227
           ++S +F +KNVTKSN E +L DLR HV+ ADFVAIDLEMTGV SAPWRESF+FDRFD+QY
Sbjct: 33  TASPTFALKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQY 92

Query: 226 LKVKDSADKFAVVQFGVCPFRWDPLKASFIAHPYNFYIFPRQEI-AGGPSPEFLCQTSSI 50
           LKVKDSA+KFAVVQFGVCPFRWD  +  F+AHP+NFY+FPRQE+   GPS EFLCQT+SI
Sbjct: 93  LKVKDSAEKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVFPRQELPVDGPSYEFLCQTTSI 152

Query: 49  DFLARYQFDFNMCIRE 2
           DFLA+YQFDFN CI E
Sbjct: 153 DFLAKYQFDFNACIYE 168


>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  218 bits (556), Expect = 3e-55
 Identities = 102/136 (75%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
 Frame = -3

Query: 406 SSSSSFTIKNVTKSNLEEALTDLRGHVKGADFVAIDLEMTGVKSAPWRESFDFDRFDIQY 227
           ++S +F +KNVTKSN E +L DLR HV+ ADFVAIDLEMTGV SAPWRESF+FDRFD+QY
Sbjct: 33  TASPTFALKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQY 92

Query: 226 LKVKDSADKFAVVQFGVCPFRWDPLKASFIAHPYNFYIFPRQEI-AGGPSPEFLCQTSSI 50
           LKVKDSA+KFAVVQFGVCPFRWD  +  F+AHP+NFY+FPRQE+   GPS EFLCQT+SI
Sbjct: 93  LKVKDSAEKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVFPRQELPVDGPSYEFLCQTTSI 152

Query: 49  DFLARYQFDFNMCIRE 2
           DFLA+YQFDFN CI E
Sbjct: 153 DFLAKYQFDFNACIYE 168


>emb|CAN76999.1| hypothetical protein VITISV_007764 [Vitis vinifera]
          Length = 720

 Score =  218 bits (556), Expect = 3e-55
 Identities = 102/136 (75%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
 Frame = -3

Query: 406 SSSSSFTIKNVTKSNLEEALTDLRGHVKGADFVAIDLEMTGVKSAPWRESFDFDRFDIQY 227
           ++S +F +KNVTKSN E +L DLR HV+ ADFVAIDLEMTGV SAPWRESF+FDRFD+QY
Sbjct: 33  TASPTFALKNVTKSNFESSLADLRRHVRDADFVAIDLEMTGVTSAPWRESFEFDRFDVQY 92

Query: 226 LKVKDSADKFAVVQFGVCPFRWDPLKASFIAHPYNFYIFPRQEI-AGGPSPEFLCQTSSI 50
           LKVKDSA+KFAVVQFGVCPFRWD  +  F+AHP+NFY+FPRQE+   GPS EFLCQT+SI
Sbjct: 93  LKVKDSAEKFAVVQFGVCPFRWDSSRHCFVAHPHNFYVFPRQELPVDGPSYEFLCQTTSI 152

Query: 49  DFLARYQFDFNMCIRE 2
           DFLA+YQFDFN CI E
Sbjct: 153 DFLAKYQFDFNACIYE 168


>ref|XP_002300380.1| predicted protein [Populus trichocarpa] gi|222847638|gb|EEE85185.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score =  218 bits (554), Expect = 5e-55
 Identities = 102/146 (69%), Positives = 122/146 (83%), Gaps = 1/146 (0%)
 Frame = -3

Query: 436 RPVLQTRIFCSSSSSFTIKNVTKSNLEEALTDLRGHVKGADFVAIDLEMTGVKSAPWRES 257
           R  L    +C+ SSSF +K+VT+SN E A+ DL+ H+K ADFVAIDLEMTGV SAPWRES
Sbjct: 10  RTALSRAYYCTFSSSFPLKHVTQSNFETAVADLKTHLKAADFVAIDLEMTGVTSAPWRES 69

Query: 256 FDFDRFDIQYLKVKDSADKFAVVQFGVCPFRWDPLKASFIAHPYNFYIFPRQEI-AGGPS 80
            +FDRFD++YLKVKDSA+KFAVVQ GVCPFRWDPL+ SFIAHP+NF+IFPRQE+     S
Sbjct: 70  LEFDRFDVKYLKVKDSAEKFAVVQLGVCPFRWDPLRLSFIAHPHNFFIFPRQEVPIDSSS 129

Query: 79  PEFLCQTSSIDFLARYQFDFNMCIRE 2
            EFLCQT+SIDFLA+Y FDFN+CIR+
Sbjct: 130 YEFLCQTTSIDFLAKYHFDFNVCIRQ 155


>ref|XP_004148252.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis
           sativus] gi|449524565|ref|XP_004169292.1| PREDICTED:
           poly(A)-specific ribonuclease PARN-like [Cucumis
           sativus]
          Length = 700

 Score =  211 bits (536), Expect = 6e-53
 Identities = 101/160 (63%), Positives = 123/160 (76%), Gaps = 18/160 (11%)
 Frame = -3

Query: 427 LQTRIFC-----------------SSSSSFTIKNVTKSNLEEALTDLRGHVKGADFVAID 299
           LQ R+FC                 +S+SSF +KNVTKSN E AL++LR HV+ ADFVAID
Sbjct: 10  LQRRLFCFIRTTNYSSAAVTAPSTASNSSFPLKNVTKSNFEAALSELRSHVRAADFVAID 69

Query: 298 LEMTGVKSAPWRESFDFDRFDIQYLKVKDSADKFAVVQFGVCPFRWDPLKASFIAHPYNF 119
           LEMTG+ SAPWR+  +FDRFD++YL VKDSA+KFAV+QFG+CPFRWD  K SF+AHP+NF
Sbjct: 70  LEMTGITSAPWRDLLEFDRFDVRYLNVKDSAEKFAVLQFGICPFRWDSAKNSFVAHPHNF 129

Query: 118 YIFPRQEI-AGGPSPEFLCQTSSIDFLARYQFDFNMCIRE 2
           +IFPR EI   GPS EFLCQT+S++FLA+YQFDFN CI E
Sbjct: 130 FIFPRHEIEVDGPSSEFLCQTTSMEFLAKYQFDFNACIYE 169


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