BLASTX nr result

ID: Lithospermum22_contig00030372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030372
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25234.3| unnamed protein product [Vitis vinifera]              140   2e-31
ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein lig...   140   2e-31
emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]   140   2e-31
ref|XP_002512779.1| zinc finger protein, putative [Ricinus commu...   139   4e-31
ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein lig...   137   1e-30

>emb|CBI25234.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  140 bits (353), Expect = 2e-31
 Identities = 56/111 (50%), Positives = 78/111 (70%)
 Frame = +3

Query: 54  SGLLIDDCKRGKRVIKKSECLHCKRLFCFQCRSPWHEKINCEEFLKLNKDGFEAEDIMLM 233
           S +L++D      ++++SEC HC+RLFC QCR PWH  + C E  +LN D    ED++L 
Sbjct: 202 SAMLLNDNAEAVMMMRESECPHCRRLFCVQCRVPWHSGMECREVQRLNADERGREDMLLK 261

Query: 234 KLAKTKKWQRCPICKFYVQRNRGCPHMSCRCGHQFCYRCGVDWPQCNGSCK 386
           KLA+ KKW+RCP CKFYV++  GC H++CRCG +FCYRCG  W   +G+C+
Sbjct: 262 KLAEEKKWKRCPQCKFYVEKIEGCVHLTCRCGFEFCYRCGGKWSVNHGTCQ 312


>ref|XP_002270721.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B [Vitis
           vinifera]
          Length = 378

 Score =  140 bits (353), Expect = 2e-31
 Identities = 56/111 (50%), Positives = 78/111 (70%)
 Frame = +3

Query: 54  SGLLIDDCKRGKRVIKKSECLHCKRLFCFQCRSPWHEKINCEEFLKLNKDGFEAEDIMLM 233
           S +L++D      ++++SEC HC+RLFC QCR PWH  + C E  +LN D    ED++L 
Sbjct: 265 SAMLLNDNAEAVMMMRESECPHCRRLFCVQCRVPWHSGMECREVQRLNADERGREDMLLK 324

Query: 234 KLAKTKKWQRCPICKFYVQRNRGCPHMSCRCGHQFCYRCGVDWPQCNGSCK 386
           KLA+ KKW+RCP CKFYV++  GC H++CRCG +FCYRCG  W   +G+C+
Sbjct: 325 KLAEEKKWKRCPQCKFYVEKIEGCVHLTCRCGFEFCYRCGGKWSVNHGTCQ 375


>emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]
          Length = 793

 Score =  140 bits (353), Expect = 2e-31
 Identities = 56/111 (50%), Positives = 78/111 (70%)
 Frame = +3

Query: 54   SGLLIDDCKRGKRVIKKSECLHCKRLFCFQCRSPWHEKINCEEFLKLNKDGFEAEDIMLM 233
            S +L++D      ++++SEC HC+RLFC QCR PWH  + C E  +LN D    ED++L 
Sbjct: 680  SAMLLNDNAEAVMMMRESECPHCRRLFCVQCRVPWHSGMECREVQRLNADERGREDMLLK 739

Query: 234  KLAKTKKWQRCPICKFYVQRNRGCPHMSCRCGHQFCYRCGVDWPQCNGSCK 386
            KLA+ KKW+RCP CKFYV++  GC H++CRCG +FCYRCG  W   +G+C+
Sbjct: 740  KLAEEKKWKRCPQCKFYVEKIEGCVHLTCRCGFEFCYRCGGKWSVNHGTCQ 790



 Score =  107 bits (267), Expect = 2e-21
 Identities = 46/90 (51%), Positives = 63/90 (70%)
 Frame = +3

Query: 54  SGLLIDDCKRGKRVIKKSECLHCKRLFCFQCRSPWHEKINCEEFLKLNKDGFEAEDIMLM 233
           S +L+DD   G  VI++SEC  C+RLFC  C  PWH  + CEE+  +N+D    ED+ML 
Sbjct: 155 SAMLVDD--NGGEVIRESECPVCRRLFCAXCYVPWHSGVGCEEYQMMNEDEKGREDLMLR 212

Query: 234 KLAKTKKWQRCPICKFYVQRNRGCPHMSCR 323
           +LA+ KKW+RCP CKFYV++  GC H++CR
Sbjct: 213 ELAQEKKWRRCPQCKFYVEKIEGCLHITCR 242


>ref|XP_002512779.1| zinc finger protein, putative [Ricinus communis]
           gi|223547790|gb|EEF49282.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 308

 Score =  139 bits (351), Expect = 4e-31
 Identities = 60/110 (54%), Positives = 77/110 (70%)
 Frame = +3

Query: 54  SGLLIDDCKRGKRVIKKSECLHCKRLFCFQCRSPWHEKINCEEFLKLNKDGFEAEDIMLM 233
           S LL++D +    VI++SEC  C RLFC QC  PWH  I CE F +LN+D    ED+M++
Sbjct: 198 SALLVNDNEG--EVIRESECPFCHRLFCAQCYVPWHSGIECEAFQRLNEDERGREDLMVI 255

Query: 234 KLAKTKKWQRCPICKFYVQRNRGCPHMSCRCGHQFCYRCGVDWPQCNGSC 383
           +LAK KKW RCP C+FYV+R +GCPHM CRCG QFCY C ++W   +G C
Sbjct: 256 ELAKEKKWSRCPKCRFYVERTQGCPHMVCRCGFQFCYGCELEWTGNHGGC 305


>ref|XP_002270687.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Vitis
           vinifera] gi|298204735|emb|CBI25233.3| unnamed protein
           product [Vitis vinifera]
          Length = 301

 Score =  137 bits (346), Expect = 1e-30
 Identities = 57/111 (51%), Positives = 77/111 (69%)
 Frame = +3

Query: 54  SGLLIDDCKRGKRVIKKSECLHCKRLFCFQCRSPWHEKINCEEFLKLNKDGFEAEDIMLM 233
           S +L+DD   G  VI++SEC  C+RLFC  C  PWH  + CEE+  +N+D    ED+ML 
Sbjct: 191 SAMLVDD--NGGEVIRESECPVCRRLFCAACYVPWHSGVGCEEYQMMNEDEKGREDLMLR 248

Query: 234 KLAKTKKWQRCPICKFYVQRNRGCPHMSCRCGHQFCYRCGVDWPQCNGSCK 386
           +LA+ KKW+RCP CKFYV++  GC H++CRC +QFCY CG  W Q +G C+
Sbjct: 249 ELAQEKKWRRCPQCKFYVEKIEGCLHITCRCTYQFCYACGAQWTQHHGGCQ 299


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