BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030356
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531919.1| RNA and export factor binding protein, putat...    58   9e-07
gb|AFW62220.1| hypothetical protein ZEAMMB73_911092 [Zea mays]         55   4e-06
gb|AAT08172.1| Hin19 [Nicotiana tabacum]                               55   4e-06
ref|NP_001078676.1| THO complex subunit 4 [Arabidopsis thaliana]...    55   6e-06
ref|NP_198588.2| THO complex subunit 4 [Arabidopsis thaliana] gi...    55   6e-06

>ref|XP_002531919.1| RNA and export factor binding protein, putative [Ricinus communis]
           gi|223528429|gb|EEF30463.1| RNA and export factor
           binding protein, putative [Ricinus communis]
          Length = 268

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/48 (58%), Positives = 36/48 (75%)
 Frame = +1

Query: 196 KNSPWQNNVLGDRFKAMESSGVESGTKLQLSNLSDEVSNEDIRELFSE 339
           +N PWQ+++L D  +A   +GVE GTKL +SNL   VSNEDIRELF+E
Sbjct: 70  RNLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIRELFAE 117


>gb|AFW62220.1| hypothetical protein ZEAMMB73_911092 [Zea mays]
          Length = 226

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/56 (48%), Positives = 40/56 (71%)
 Frame = +1

Query: 172 LYQTMCSTKNSPWQNNVLGDRFKAMESSGVESGTKLQLSNLSDEVSNEDIRELFSE 339
           ++Q+   TK+  W+ ++  D   +M +SG+E+GTKL +SNL   VSNEDI+ELFSE
Sbjct: 4   IFQSFSRTKDMTWRPDLFSD---SMAASGIETGTKLYISNLDYGVSNEDIKELFSE 56


>gb|AAT08172.1| Hin19 [Nicotiana tabacum]
          Length = 219

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = +1

Query: 163 WVYLYQTMCSTKNSPWQNN--VLGDRFKAME-SSGVESGTKLQLSNLSDEVSNEDIRELF 333
           W    Q+   TKN PWQN   +  D  +A   SSG+ESGTK+ +SNL   V+N DIRELF
Sbjct: 1   WACSLQSSRRTKNLPWQNGNGLFEDSLRAAGISSGLESGTKVYVSNLDVGVTNSDIRELF 60

Query: 334 SE 339
           SE
Sbjct: 61  SE 62


>ref|NP_001078676.1| THO complex subunit 4 [Arabidopsis thaliana]
           gi|332006840|gb|AED94223.1| THO complex subunit 4
           [Arabidopsis thaliana]
          Length = 280

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = +1

Query: 196 KNSPWQNNVLGDRFKAMESSGVESGTKLQLSNLSDEVSNEDIRELFSE 339
           ++ PWQ+ +  D  +A  +SGVE GT+L ++NL   V+NEDIRELFSE
Sbjct: 68  RSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 115


>ref|NP_198588.2| THO complex subunit 4 [Arabidopsis thaliana]
           gi|37201990|gb|AAQ89610.1| At5g37720 [Arabidopsis
           thaliana] gi|110735849|dbj|BAE99901.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332006839|gb|AED94222.1| THO complex subunit 4
           [Arabidopsis thaliana]
          Length = 288

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/48 (52%), Positives = 35/48 (72%)
 Frame = +1

Query: 196 KNSPWQNNVLGDRFKAMESSGVESGTKLQLSNLSDEVSNEDIRELFSE 339
           ++ PWQ+ +  D  +A  +SGVE GT+L ++NL   V+NEDIRELFSE
Sbjct: 68  RSLPWQSGLFEDGLRAAGASGVEVGTRLHVTNLDQGVTNEDIRELFSE 115