BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00030341
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                            66   2e-09
gb|ABA99961.1| retrotransposon protein, putative, unclassified [...    65   7e-09
gb|AAX95226.1| retrotransposon protein, putative, unclassified [...    59   1e-07
gb|ABA91843.2| retrotransposon protein, putative, unclassified [...    59   1e-07
ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score = 65.9 bits (159), Expect(2) = 2e-09
 Identities = 32/91 (35%), Positives = 54/91 (59%)
 Frame = +2

Query: 62  IADGNKLMSHMIAPDFVWKIQGHKFTPSVRILPLEACQMVVGVDWLQHHSPVQFNIQKMQ 241
           +ADGNKL+S      F WK+QG +F  ++ +LPL  C MV+GV WL+   P+ ++  K++
Sbjct: 58  VADGNKLISSSTCRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLR 117

Query: 242 LTLLSDT*KVTLQAATFQADLQLISAKKLTK 334
           +       K+ L+ ++    L++I  K+L K
Sbjct: 118 MEFQFQGQKIVLRGSS-GPSLKIIEGKQLKK 147



 Score = 20.4 bits (41), Expect(2) = 2e-09
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 3  GSTNTFLDESLAKQL 47
          GST+ FLD ++A +L
Sbjct: 30 GSTHNFLDAAVAAKL 44


>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1619

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = +2

Query: 62  IADGNKLMSHMIAPDFVWKIQGHKFTPSVRILPLEACQMVVGVDWLQHHSPVQFNIQKMQ 241
           +A+G  L    I P+  W++QGHKF  ++R+LP+ +  M++G+DWL  HSP+  +     
Sbjct: 516 VANGETLCCGAIIPNCEWQVQGHKFQTTLRVLPITSYDMILGMDWLMKHSPMSVDWSLKT 575

Query: 242 LTLLSDT*KVTLQAATFQ-ADLQLISAKKLTKWMK 343
           +TL      VTLQ    + A  +++SA ++ ++ +
Sbjct: 576 ITLSLQGTTVTLQGVHSELAHCKILSANEMQQFQQ 610


>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1513

 Score = 58.9 bits (141), Expect(2) = 1e-07
 Identities = 26/91 (28%), Positives = 51/91 (56%)
 Frame = +2

Query: 62  IADGNKLMSHMIAPDFVWKIQGHKFTPSVRILPLEACQMVVGVDWLQHHSPVQFNIQKMQ 241
           +A G +L S +  PD +++IQG  F+    ++PL+   +++G DW+  +SP+  +++K +
Sbjct: 485 VAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIYKYSPITLDLKKRE 544

Query: 242 LTLLSDT*KVTLQAATFQADLQLISAKKLTK 334
           L +      +TLQ  T      L+ + K+ K
Sbjct: 545 LGITKGEKVITLQDFTNTGKHLLVDSSKVDK 575



 Score = 21.6 bits (44), Expect(2) = 1e-07
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 3   GSTNTFLDESLAKQLEIPLI 62
           GS +TF+D+  A + + PL+
Sbjct: 457 GSPSTFMDQEYAIRNDCPLV 476


>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1411

 Score = 58.9 bits (141), Expect(2) = 1e-07
 Identities = 26/91 (28%), Positives = 51/91 (56%)
 Frame = +2

Query: 62  IADGNKLMSHMIAPDFVWKIQGHKFTPSVRILPLEACQMVVGVDWLQHHSPVQFNIQKMQ 241
           +A G +L S +  PD +++IQG  F+    ++PL+   +++G DW+  +SP+  +++K +
Sbjct: 383 VAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGADWIYKYSPITLDLKKRE 442

Query: 242 LTLLSDT*KVTLQAATFQADLQLISAKKLTK 334
           L +      +TLQ  T      L+ + K+ K
Sbjct: 443 LGITKGEKVITLQDFTNTGKHLLVDSSKVDK 473



 Score = 21.6 bits (44), Expect(2) = 1e-07
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 3   GSTNTFLDESLAKQLEIPLI 62
           GS +TF+D+  A + + PL+
Sbjct: 355 GSPSTFMDQEYAIRNDCPLV 374


>ref|XP_002330315.1| predicted protein [Populus trichocarpa] gi|222871350|gb|EEF08481.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 59.7 bits (143), Expect(2) = 1e-07
 Identities = 24/63 (38%), Positives = 45/63 (71%)
 Frame = +2

Query: 62  IADGNKLMSHMIAPDFVWKIQGHKFTPSVRILPLEACQMVVGVDWLQHHSPVQFNIQKMQ 241
           +A+G  ++  M +P F W +QG++F  ++R+L L+   +++GVDWL+ +SPV F+  K++
Sbjct: 453 VANGTVMLCEMQSPGFTWFMQGYEFKANLRVLKLDRHDIMLGVDWLKQYSPVLFDFIKLR 512

Query: 242 LTL 250
           L+L
Sbjct: 513 LSL 515



 Score = 20.8 bits (42), Expect(2) = 1e-07
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 3   GSTNTFLDESLAKQLEI 53
           GST++F+DE    +L +
Sbjct: 425 GSTHSFIDEGTITELNV 441